Gene Information

Name : BURPS668_A1506 (BURPS668_A1506)
Accession : YP_001062502.1
Strain :
Genome accession: NC_009075
Putative virulence/resistance : Virulence
Product : sigma-70 family RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1445970 - 1446479 bp
Length : 510 bp
Strand : +
Note : identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937

DNA sequence : 
ATGCCGGCCAACACTTTGCGTCTGCAGCGGGAGATCGCTGCGCTCTATACCGGTCATCGCGGCTGGCTGCACGGCTGGCT
GTCGAAGAAGCTCGGCTGCGGCGAGCGCGCGGCCGATCTGGTTCACGACACGTTCATCCGCCTGCTCGCACGCGACGAGC
CGATCGACGCGGCCGAGCCGCGCGCGTTCCTGACGACCGTCGCGCAGCGCGTGCTGTACAACCACTGGCGGCGCGAGCGG
CTCGAACGCGCGTATCTCGACGCGCTCGCGCAATGGCCGGAGGCGGTCGCGCCGTCGCCGGAGACACGCGCCGTCCTGTT
CGAGACGCTCGTCGAGGTCGACCGGATGCTCGACGGGCTGCCCGCCGTCGTTCGCCGCGCGTTCCTGCTCGCGCAGCTCG
ACGGCATGACGCACGCGCAGATCGCGGCCGAGCTGCGCGTGTCGCTCGCGACCGTCAAGCGCTACCTGGTGAAAGCGGGC
GCGCAGTGCTACTTCGCGATCGCCGCATGA

Protein sequence : 
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEPRAFLTTVAQRVLYNHWRRER
LERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGLPAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAG
AQCYFAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS668_A1506 YP_001062502.1 sigma-70 family RNA polymerase sigma factor VFG1049 Protein 4e-33 47