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Name : BURPS1106A_3330 (BURPS1106A_3330) Accession : YP_001067567.1 Strain : Genome accession: NC_009076 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3253201 - 3254694 bp Length : 1494 bp Strand : + Note : identified by match to protein family HMM PF01565; match to protein family HMM PF02913 DNA sequence : ATGAACGCCCCCGCCGAACTGTCGGCCGATCTGCGCGCGCAGCGCCAGCGCGAAGTCGTGCAGGCGCTGATGGCCGTGCT GCCGACCCATTGCCTGCTGCATCGCGACGAGGACACGGCCGCGTACGAATGCGATGCGCTGTCCGCGTACCGCCGGCTGC CGCTCGCGGTGGCGCTGCCGGAGACCGAATCGCAGGTGCAGCGGATCGTGCAGATCTGCCGGCGCATGAACGTGCCGATC GTGCCGCGCGGCGCGGGCACGAGCCTGTCGGGCGGCGCGCTGCCGATCGGGCACGGCGTCGTGCTGTCGCTCGCGCGCTT CACGCGGATCGTCGAAGTCGATTCCTATGCGCGCACGGCCACCGTTCAGCCCGGCGTGCGCAATCTCGCGATCTCCGAGG CCGCCGCGCCGTACGGCCTCTACTACGCGCCCGATCCCTCGTCGCAGATCGCGTGCACGATCGGCGGCAACGTGTCGGAG AACTCGGGCGGCGTTCATTGCCTGAAATACGGGCTCACGTGCCATAACGTGCTGCGCGTGCGCGGCGTGACGATCGACGG CGAGATCGTCGAGTTCGGCTCGCTCGCACCCGACGTGCCGGGCCTCGATCTGCTCGCCGTCACGATCGGCAGCGAAGGCA TGTTCATCGTCGTCACCGAGGTGACGGTGCGGCTGATCCCGAAGCCGCAGTGCGCGCAGCTCGTGATGGCGAGCTTCGAC GACGTCGTCAAGGGCGGCGAGGCCGTTGCCGCGATCATCGCGTCGGGCATCATTCCGGCCGGGCTCGAGATGATGGACAA ACCCGCGACGCAGGCGGTCGAGGCGTTCACGCACGCGGGCTACGATCTCGACGCGGCCGCGATCCTGCTGTGCGAATCGG ACGGCACACAGGAGGAAGTCGCCGAGGAGATCGTGCGGATGACCGCGGTGCTGCGCGAGCACGGCGCGACGCGCATCCAG GTCTCGCGCAGCGAGGCCGAGCGGCTGCGCTTCTGGTCGGGCCGCAAGAACGCGTTCCCGGCCGCGGGCCGCATTTCGCC CGACTATTACTGCATGGACGGCACGGTGCCGCGCCGCGCGATCGGGCCGCTCCTCGCGCGCATCGAGCAGATGGAGACGA AGTACAGGCTGCGCTGCATCAACGTGTTCCACGCGGGCGACGGCAACATGCACCCGCTCATCCTGTTCAACGCGAACGAC GTCGACGAGCTGCACCGCGCGGAGGCGTTCGGCGCGGACATCCTCGAGACCTGCGTCGAATTCGGCGGCACGGTGACGGG CGAGCACGGCGTCGGCGTCGAGAAGCTGAACTCGATGTGCGTGCAGTTCTCGCGCGAGGAGTGCGATGCGTTCTTCGCGG TCAAGCGCGCGTTCGATCCGCCCGAGCTGCTGAATCCGGACAAGGGCATTCCGACCCGCGCGCGCTGCGCCGAATACGGC CGGATGCACGTGCGCGGCGGGCTGCTGCCGCATCCGGACCTGCCGCGCTTTTGA Protein sequence : MNAPAELSADLRAQRQREVVQALMAVLPTHCLLHRDEDTAAYECDALSAYRRLPLAVALPETESQVQRIVQICRRMNVPI VPRGAGTSLSGGALPIGHGVVLSLARFTRIVEVDSYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVSE NSGGVHCLKYGLTCHNVLRVRGVTIDGEIVEFGSLAPDVPGLDLLAVTIGSEGMFIVVTEVTVRLIPKPQCAQLVMASFD DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAAAILLCESDGTQEEVAEEIVRMTAVLREHGATRIQ VSRSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRAIGPLLARIEQMETKYRLRCINVFHAGDGNMHPLILFNAND VDELHRAEAFGADILETCVEFGGTVTGEHGVGVEKLNSMCVQFSREECDAFFAVKRAFDPPELLNPDKGIPTRARCAEYG RMHVRGGLLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-128 | 59 |
