Gene Information

Name : BMA10247_A2018 (BMA10247_A2018)
Accession : YP_003276038.1
Strain :
Genome accession: NC_009079
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1951305 - 1951853 bp
Length : 549 bp
Strand : -
Note : VC_A0107 family

DNA sequence : 
ATGGTTCGACAAAAGGATGGACAGAAATTCATCGGGGAGAGTCGTGCGCCCCGCGTGCAGATTGAATACGACGTGGAGGT
GTACGGCTCGCAGAAGAAGGTCGAGCTGCCGTTCGTCGCGGGCGTGATGGCGGACCTGTCGGGCGACAACGTCGAGCCGC
TCGGCCCGGTCGAGGATCGGCGCTTTCAGGAGATCGACGTCGAGAACTTCGATGAGCGCATGGCGCAGATCGCGCCGTCG
CTGAGCTATCACGTGAAGAACGTGCTGACCAACGACGGCACGCTGATTCCGATCGATCTGACGTTCACGTCGATGGAATC
GTTCGAGCCGGCGGACGTCGTCAAGCGCATTCCCGAGCTGTCGACGCTGCTCGAGGCGCGCAACCGGCTGAAGGAGCTGC
TGACCTACATGGACGGCAAGGCGGCAGCCGAGGACGTGATCCAGGAATTGTTGAAGAGCCCGCAGTGGGCGAACGAGGCC
GACGCGGCGGAGCAATCCGGCGGCGCCGGCGAGGGTGGAGACCATCAACCGGAAGAGGGTGCGAAATGA

Protein sequence : 
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDRRFQEIDVENFDERMAQIAPS
LSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPELSTLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEA
DAAEQSGGAGEGGDHQPEEGAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-41 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMA10247_A2018 YP_003276038.1 type VI secretion protein VFG2069 Protein 1e-42 54