Gene Information

Name : rnhA (BMA10247_0556)
Accession : YP_001080125.1
Strain :
Genome accession: NC_009080
Putative virulence/resistance : Unknown
Product : RNase H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 539340 - 539786 bp
Length : 447 bp
Strand : -
Note : identified by match to protein family HMM PF00075

DNA sequence :
ATGACGTTGCAAACCATCGACATCTATACCGACGGCGCCTGCAAGGGCAACCCCGGCCCGGGCGGCTGGGGCGCGCTGCT
GCGCTACGGCGCGCAGGAGAAAGAGCTTTTCGGCGGCGAACCCGGCACGACCAACAACCGAATGGAGCTCACCGCGGTGA
TCGCCGCGCTCGAGGCGCTCAAGCGCCCGTGCAAGGTGGTCGTCCACACCGATTCGCAATACGTGCAAAAAGGCATCAGC
GAATGGATCCACGGCTGGAAGAAGAAAGGCTGGGTCACCGCCGCGAAAACGCCCGTGAAGAACGCGGACCTCTGGCAGCG
GCTCGATGCGCTCGTCGCGCAGCACGACGTCGAATGGCGCTGGGTGAAGGGGCACGCCGGCCATCCGGAGAACGAGCGCG
CGGACGCGCTCGCGAACCGCGGCGTCGAATCGCTCGCGCAGGCATGA

Protein sequence :
MTLQTIDIYTDGACKGNPGPGGWGALLRYGAQEKELFGGEPGTTNNRMELTAVIAALEALKRPCKVVVHTDSQYVQKGIS
EWIHGWKKKGWVTAAKTPVKNADLWQRLDALVAQHDVEWRWVKGHAGHPENERADALANRGVESLAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-40 59