Gene Information

Name : CD630_15390 (CD630_15390)
Accession : YP_001088040.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1786707 - 1787453 bp
Length : 747 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter

DNA sequence : 
ATGAACATATTGAGTATTAGAAATATATCAAAAACATATTGTGGAAATATTCCATTTAAAGCATTAGATAAGGTTAGTCT
AAATATAGAAAAGGGAGAATTTGTGTCTGTTATGGGACCATCTGGAAGTGGTAAATCTACTCTTTTAAATATAATATCTA
CAGTTGATAGACAGAGTGAAGGTGAGGTTGTATTAGATGGATATGATGTAAGTAAATTGAAAGGAGAAAAACTTGCTGAA
TTTAGAAGGAAACAACTTGGTTTTGTATTTCAGGATTTTAATTTGATTGACACTTTAACTGTTGGCGAAAATATTATGTT
GCCACTTACACTAGAGGGGGCAAGTATCAAAGATATGAATATACAAACTAAAAGTATATCTAAATTTTTAGGAATAGATA
AAATTTTAGATAGAAAAACCTATGAAATTTCAGGAGGTCAAGCTCAAAGGTGTGCTATTGCTAGAGCTATTATAAATAAA
CCTGCCATACTTCTTGCAGATGAGCCAACTGGAAATCTTGATTCAAAATCTACTGATGATGTTTTGAAATTATTTACTAG
GATAAACAAAGAACAAAATGTAACAACACTTATGGTAACTCATGAAGCATATAGTGCAAGTTATTCAGATAGAGTAATTT
TTATAAAAGATGGTTGTATATATACAGAAATAAAAAAATCTGAAAGCAGTAATTCTTTCTATTCTGATATACTAGCTGTT
TTGTCTCAAATAGGAGGTGTAAGATAG

Protein sequence : 
MNILSIRNISKTYCGNIPFKALDKVSLNIEKGEFVSVMGPSGSGKSTLLNIISTVDRQSEGEVVLDGYDVSKLKGEKLAE
FRRKQLGFVFQDFNLIDTLTVGENIMLPLTLEGASIKDMNIQTKSISKFLGIDKILDRKTYEISGGQAQRCAIARAIINK
PAILLADEPTGNLDSKSTDDVLKLFTRINKEQNVTTLMVTHEAYSASYSDRVIFIKDGCIYTEIKKSESSNSFYSDILAV
LSQIGGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_15390 YP_001088040.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 49
CD630_15390 YP_001088040.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-32 43
CD630_15390 YP_001088040.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-31 41
CD630_15390 YP_001088040.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-31 41