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Name : cobT (CD630_34390) Accession : YP_001089959.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 4029631 - 4030677 bp Length : 1047 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 20532744, 19880598, 19376900, 14704351,12869542,12408752, 11215515, 11759672, 8546704, 3015883; Product type e : enzyme DNA sequence : ATGAGTTTATTAGAAAGTATATCAAAAAACATATATTCCCTAGATAACTCTTCTATTGAAAAAACAAAGCAGAGATTGGA TAGGCTTATACATCCAACTGGAAGCTTAGGAAAGATAGAAGATATTTGCATGCAATTAGCAGGAATATTTGGCAATGAAA ATTTTGACACAAGTAAAAAGGTTATAATTGCTTTTGCGGGAGACCATGGTGTATATGAAGAAGGCGTAGCACCTGACCCT CAAAATATAACAAAATTACAGTTTCCAAATTTTTCGAAAGGTCTATGTGGAGTTGGAGTAATAAGTAAATTTGTAGGGGC AGATGTTGTAGCTGTAGATGTAGGAATAAACTGTGATGAAAAACTGGATGGGGTATTAGACTACAAGATAAGAAAAGGGA CATCAAATATGGCAAAAGGTCCAGCTATGAGTAAACAAGAAGCCATTAGATGTTTAGAGATAGGTATTGAAATAGCAGAA CAGTGTATAGAAAAAGATTATAAGGTTATTGGTATTGGGGAGATGGGTATAGCAAATACTACTCCAAGTACAGCAATAAT ATCTGTAATTTCAGGGTGTGACCCGTTAGAAGTTACTGGTATAGGTGCAGGTCTTAAGAAAGAAAGACTAAAGCATAAGG CTGAAGTAATTAGAAAGGCTATTGAAATTAATAATCCAAATCCAACTGATGGAGTAGATATTTTATCTAAAGTAGGAGGA TTTGAAATAGGCTCAATGGCAGGTGTTATATTAGGTTGTAGTGCTAATAGGATTCCAGTAGTAATTGATGGGTTTATTTC TTATGCAGCAGCATTAATTGCATATAAGATAAATCCAAAAACTAGAGAATATATGATAGCATCTCATTTATCAGCAGAAT CAGGAACTAAAAGAGCATTAGACATATTAAAATTAGACCCTCTATTAAATATGGATATGAGATTAGGTGAGGGAAGTGGA GCTGCTTTAGCATTTGATATAATAGAAGCTTCAAACTATACTTACAAAAATATGGCAACTTTTGATGAAATTGACATGGG AAGATAA Protein sequence : MSLLESISKNIYSLDNSSIEKTKQRLDRLIHPTGSLGKIEDICMQLAGIFGNENFDTSKKVIIAFAGDHGVYEEGVAPDP QNITKLQFPNFSKGLCGVGVISKFVGADVVAVDVGINCDEKLDGVLDYKIRKGTSNMAKGPAMSKQEAIRCLEIGIEIAE QCIEKDYKVIGIGEMGIANTTPSTAIISVISGCDPLEVTGIGAGLKKERLKHKAEVIRKAIEINNPNPTDGVDILSKVGG FEIGSMAGVILGCSANRIPVVIDGFISYAAALIAYKINPKTREYMIASHLSAESGTKRALDILKLDPLLNMDMRLGEGSG AALAFDIIEASNYTYKNMATFDEIDMGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 3e-63 | 44 |
