Gene Information

Name : tkt' (CD630_34590)
Accession : YP_001089979.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : 2.2.1.1
Position : 4052939 - 4053880 bp
Length : 942 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16143417, 12882400, 9371765; Product type e : enzyme

DNA sequence :
ATGAGTAAAATGGCGACGAGAGAAGCATATGGTAAAGCATTAGTAAAATTAGGTCAAATAAATGACAATGTTGTAGTATT
AGATGCAGATTTATCAAAGTCTACAAAAACACATGATTTTTACAAGTCATTTCCAGATAGATTTTTTAATATGGGTATAG
CTGAACAAAATTTAATAGGCGCTGCTTGTGGATTATCAACTGCTGGTAAAATACCTTTTGCAAGTACTTTTGCTATGTTT
GCTACGGGAAGGGCTTTTGAGATTATAAGAAATTCAGTTTGTTATCCAAAGCTAAATGTAAAAATATGTGCTACTCATGC
AGGTCTTACTGTTGGAGAGGATGGAGCATCTCATGAAAGTGTGGAAGATATTGCTATAATGAGAGCTATACCAAATATGA
CAGTTCTTGTTCCAGCTGATGGAGTTGAAACAGAAAAAATTATTTTTGAAATAGCTAAGTATAATGGACCTGTTTATGTT
AGATTAGGGAGAAGTTCAGTACCAGTTTTATTTGATGAAGATTATAAATTTGAAATAGGAAAAGGTACAGTCTTAAGAGA
AGGAAAGGATGTATCAATTATAGCTTGTGGAATTATGGTAAATGAAGCTCTATTAGCACAAGAAAAGTTGCAAGAAGAAG
GTATAAGTGCTAGAGTTATAAACATGTCCTCGATAAAACCTATAGACAAAGATTTAATATTAGAATCAGCAAAAGAAACG
AATGCTATTGTAACTGTAGAAGAACATAGCATAATTGGGGGATTAGGTTCTGCTGTAAGTGAGGTAGTAGGAGAGTCTTG
TCCAACCATTGTAAAGAAAGTTGGAATTAAAGATACATTTGGAGAATCTGGTACTCCAAATGAATTGTTAAAAAAATATG
AATTAACTTGTGATGACATAATAAAGACTGTTAAAGAAGCTATTATTGCAAAAAGAATGTAA

Protein sequence :
MSKMATREAYGKALVKLGQINDNVVVLDADLSKSTKTHDFYKSFPDRFFNMGIAEQNLIGAACGLSTAGKIPFASTFAMF
ATGRAFEIIRNSVCYPKLNVKICATHAGLTVGEDGASHESVEDIAIMRAIPNMTVLVPADGVETEKIIFEIAKYNGPVYV
RLGRSSVPVLFDEDYKFEIGKGTVLREGKDVSIIACGIMVNEALLAQEKLQEEGISARVINMSSIKPIDKDLILESAKET
NAIVTVEEHSIIGGLGSAVSEVVGESCPTIVKKVGIKDTFGESGTPNELLKKYELTCDDIIKTVKEAIIAKRM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 5e-46 47
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 2e-38 45
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 5e-49 42
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 4e-49 42