Gene Information

Name : Shew_1165 (Shew_1165)
Accession : YP_001093294.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1341110 - 1341319 bp
Length : 210 bp
Strand : -
Note : PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: ppr:PBPRB1929 putative Cold shock-like protein

DNA sequence :
ATGTCTAATACAACTGGTACCGTTAAGTGGTTTAACGAAGATAAAGGTTTTGGTTTCATCGAGCAGGCAAATGGCGGCGC
TGATGTGTTCGTGCATTTCCGCGCTATCGTATCTGACGGATACAAGACGCTAGCCGAAGGCCAAAAGGTCACCTTCGATA
TCGAGCAAGGTCAAAAAGGCTTGCAAGCAGCGAACGTAGTTCCGGCTTAA

Protein sequence :
MSNTTGTVKWFNEDKGFGFIEQANGGADVFVHFRAIVSDGYKTLAEGQKVTFDIEQGQKGLQAANVVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-15 60