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Name : Shew_1830 (Shew_1830) Accession : YP_001093955.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L25 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1825 EC number : - Position : 2105880 - 2106167 bp Length : 288 bp Strand : + Note : the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress respo DNA sequence : ATGTCTTACACAATTACCGCACAAACCCGCACTGAAATTGGGAAAGGTTCGAGCCGCCGCCTACGTCATGCTGGTAAAGT TCCTGCAGTTATCTATGGTGCGGGCAAAGAAGCCGTTTCTATCGAATTCGAACACCGTTCAATCATCAACATCCAAACTA ACGATGATTTCTACAACAGCGACATCACTATCGTTCTAGACGGTAAAGAAGTTAAAGTTCGTGTTCAAGCTATGCAACGT CACGCGTTCAAGCCTATGATCGAGCACGTGGATTTCAAATTCGCTTAA Protein sequence : MSYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSDITIVLDGKEVKVRVQAMQR HAFKPMIEHVDFKFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_01051 | YP_001437155.1 | 50S ribosomal protein L25 | Not tested | Not named | Protein | 2e-23 | 53 |
