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Name : Shew_0193 (Shew_0193) Accession : YP_001092324.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 199263 - 201239 bp Length : 1977 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCTGAATTAGGACACTTTTCGTTGATAATAGGATTGGCATTCGCCTTTCTATTGGCCAGCGTTCCCTTAATCGG TGTTGCTCGCAAAGATCAATATCTGGTGCGTTATGCCTGGCCGTTGAGTTACGGCATGTTTTTCTTTATCGCTCTCTCCG TGATCGTCCTGGGTTATAGCTTTGCCGTCGACGATTTCTCTGTAGCCTATGTTGCACACCACTCAAACTCTCAGCTGCCG ATCTTCTTCAAGATCGCCGCGGTATGGGGTGGTCACGAAGGTTCATTACTCTTCTGGGTGTTTGCCCTGTCTGTCTGGAC GGCATCGGTTGCCTTCTTCAGTAAGGGGTTAGAAGAGGTCTTCACCGCTCGCGTACTCGCTATTCTGGCGATGATAGTGA TCGGCTTCTGTCTCTTCATGCTGCTGACTTCGAGTCCATTTGAGCGTCTGTTCCCGATTCCTATGGAGGGACGCGACCTT AACCCAATGCTGCAGGACGTGGGACTCATCTTTCACCCACCTATGCTGTACCTGGGCTATGTTGGTTTCTCGGTGAGCTT TGCCTTCGCCATCGCCGCGCTCATGGGCGGACGTCTCGATTCCGCCTGGGCACGTTGGAGTCGTCCTTGGACGCTTGCGG CCTGGATCTTCCTGACCGGCGGTATCTCGCTCGGTTCTTGGTGGGCATATTACGAGCTAGGCTGGGGCGGCTGGTGGTTC TGGGATCCCGTCGAAAACGCGTCATTCATGCCTTGGTTGATCGGTACCGCACTGCTGCACTCAGTGATCGTGACCGAGAA GCGTGCAACCTTCCGTAACTGGACGGTACTGCTTTCTATATTCGCATTCTCGCTGAGTCTGCTAGGCACCTTTATCGTGC GTTCAGGCGTACTGACTTCGGTGCACTCATTCGCGGCGGATCCTAGCCGTGGTATGTTCATCCTCTTGCTGCTGGGTCTC GCCATCGGCGGCTCACTGACGCTGTTTGCCTTCCGCGCAAGCGACATGAAGAGCCCTGCGCGTTTCGAGCTGATGTCGAA AGAAACCATGCTGCTGGTAGGTAACATCCTCCTTACCGTAGCTTGTGGTACCGTGCTGCTGGGCACACTCTACCCACTGC TGATCGATGCCCTTAACATGGGTAAGATCTCTGTAGGCCCACCATACTTCAACGCGGTATTCGTGCCGATTGCACTCGTG CTGTTTGCCTTCATGGGTATTGGCCCTAGCATCCGCTGGAAGCGCGCTAAGGCAGGTGAACTCAGGGCCAAGCTGCTGGT GCCTGCCATCGTCTCTGCCGTTATCGGTGTGGCGACGCCTTTCCTGGTGGACGGCAAGTTTAATGCTTGGGTGATGTTCG GTATTGGCCTGGCCGCTTGGGTAACAGTTGCTACGCTGCGCGCCGCCTACGACATCATGCAGTCTAAAGATGGCCTGAGC CTGGCGCGTATGGGGCGCAGTCAGCTAGGTATGATCATCGCTCACTTAGGTATCGCCGTCTCTGTGGTCGGCGCGACTAT GGTGTCTAACTACTCGATCGAGAAGAGTGTTCGCATGGGCCCTGGTATCACCCAGGAACTGGCGGGCTATAGCTTCCACT ACATCGAGACCAAGAATGTCGTCGGTCCTAACTATACCGCCCAGCAGGGTCAGGTCGAAGTGACCAAAGACGGTGAGTTC ATTACTCTGCTTAAACCTGATCGTCGTCAGTACAACGTACGTACCATGGACATGACAGAGGCGGGCATCGATTGGGGACT GTTCCGCGATCTCTATATCACCATGGGCGATCCAATCAGCCGCACCGAGTTTGCCGTGCGTCTGAACTACAAGCCATTCG TGCGCTGGTTATGGTTCGGTAGCATCTTCATGATGGTAGGTGGTCTGTTCGCCGCGTCTGATAAGCGTTACCGCAGAGCC AAGGCGACCGAAACTGCCGGTGAAAAAGCCAAACAAGCAAAATTAGCAACCGCATAA Protein sequence : MIPELGHFSLIIGLAFAFLLASVPLIGVARKDQYLVRYAWPLSYGMFFFIALSVIVLGYSFAVDDFSVAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFALSVWTASVAFFSKGLEEVFTARVLAILAMIVIGFCLFMLLTSSPFERLFPIPMEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMGGRLDSAWARWSRPWTLAAWIFLTGGISLGSWWAYYELGWGGWWF WDPVENASFMPWLIGTALLHSVIVTEKRATFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASDMKSPARFELMSKETMLLVGNILLTVACGTVLLGTLYPLLIDALNMGKISVGPPYFNAVFVPIALV LFAFMGIGPSIRWKRAKAGELRAKLLVPAIVSAVIGVATPFLVDGKFNAWVMFGIGLAAWVTVATLRAAYDIMQSKDGLS LARMGRSQLGMIIAHLGIAVSVVGATMVSNYSIEKSVRMGPGITQELAGYSFHYIETKNVVGPNYTAQQGQVEVTKDGEF ITLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYITMGDPISRTEFAVRLNYKPFVRWLWFGSIFMMVGGLFAASDKRYRRA KATETAGEKAKQAKLATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-148 | 53 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-126 | 52 |
