|
Name : Shew_2002 (Shew_2002) Accession : YP_001094127.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : glyceraldehyde-3-phosphate dehydrogenase, type I Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.12 Position : 2315161 - 2316171 bp Length : 1011 bp Strand : + Note : KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase DNA sequence : ATGACTATCCGCGTAGCAATTAACGGCTATGGCCGTATCGGTAGAAACGTACTTCGCGCACTTTATGAAAGCGAAAAGCA GTACCCCATCCAAATCGTTGCCATCAACGACCTGGGTGATGCTTCAATCAACGCTCACCTGACTAAGTACGACTCTGTAC ACGGTCGCTTCAACGCCAAAGTTGAGCACGACGACGAAGCTATCTACGTCAACGAAGACAAGATCAAAACTTTCTCTGAA CGTGACCCAGCTAAACTGCCTTGGGCCGAGCTTGAAGTCGATGTTGTGTTCGAATGTACCGGTATCTTCACTTCTAAAGA AGCGGTTCAGCCACACCTAAACGCTGGCGCGAAGAAAGTGATCATCTCTGCACCGGGTAAGAACGTTGACGCGACTGTTG TTTACGGCGTAAACAACGATGTGATCACCTCTGACATGACTGTGATCTCTAACGCTTCTTGTACCACCAACTGTCTGGCG CCTTTCGCTAAGCCGCTGAACGACGAGATTGGTATCGAATCGGGTCTGATGACCACTATCCACGCTTACACTAACGACCA GCGTCTATCTGACGTTTATCACACAGACCTACGCCGCGCTCGTGCCGCCGCTATGTCTATGATCCCAACTAAGACTGGTG CTGCTGCAGCCGTTGGTCTAGTGGTACCTGAGCTGGCTGGGAAGTTCGACGGTATGGCAGTACGTGTACCTACAGTAAAC GTATCTCTGGTGGATCTCTCTTTCGTTGCCGCGCGCGACACCACAGTTGAAGAGATCAACGCCATCATCGAGAAGGCTGC AAGTGTTGCACCTATGAGTGAAGTGCTGTCGGTAAACAAAGAGCCATTGGTTTCTATCGACTTCAACCACAACCCATTCT CATCTAACTTCGATGCGACACAGACCCGTGTAAATGGTCGTCTGGTTAAAGTGATGGCGTGGTACGACAACGAATGGGGC TTCAGTAACCGTATGCTAGACAACGCAGTCGCGCTGATGACTGCTAAGTAA Protein sequence : MTIRVAINGYGRIGRNVLRALYESEKQYPIQIVAINDLGDASINAHLTKYDSVHGRFNAKVEHDDEAIYVNEDKIKTFSE RDPAKLPWAELEVDVVFECTGIFTSKEAVQPHLNAGAKKVIISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLA PFAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAAMSMIPTKTGAAAAVGLVVPELAGKFDGMAVRVPTVN VSLVDLSFVAARDTTVEEINAIIEKAASVAPMSEVLSVNKEPLVSIDFNHNPFSSNFDATQTRVNGRLVKVMAWYDNEWG FSNRMLDNAVALMTAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 6e-81 | 50 |
