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Name : rnhA (Shew_2112) Accession : YP_001094237.1 Strain : Shewanella loihica PV-4 Genome accession: NC_009092 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2447746 - 2448222 bp Length : 477 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCACGGACTGAAACAACTCTTAATCTTTACCGATGGTTCTTGCCTGGGCAATCCGGGTCCCGGCGGCTATGGCGTGGT GATGAAATATAAGGCCCACGTGAAGGAACTCAGCGGCGGTTTTGCCTTAACCACCAACAACCGCATGGAGCTCCTGGCCC CGATCATGGCGCTGGAGGCGCTCAAGGAGCCCTGTCAGATCATTCTCACCAGCGACAGCCAATATATGCGCCAGGGGATC ACCCAGTGGATCCATGGCTGGAAGAAGCGCGGTTGGCTCACCGCCGCTAAGGAACCTGTTAAGAATGTCGACCTCTGGCA GCGCCTGGATGCCGCCACCAGTACACATAAGATAGACTGGCGCTGGGTAAAGGGCCACGCGGGTCATATCGAAAATGAGC GCTGCGATACCCTGGCGCGAGAAGCCGCCGAGGCTGGCCCGAGTGAGGTAGATACAGGCTATCAGGCAAAAGGCTAG Protein sequence : MHGLKQLLIFTDGSCLGNPGPGGYGVVMKYKAHVKELSGGFALTTNNRMELLAPIMALEALKEPCQIILTSDSQYMRQGI TQWIHGWKKRGWLTAAKEPVKNVDLWQRLDAATSTHKIDWRWVKGHAGHIENERCDTLAREAAEAGPSEVDTGYQAKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 9e-50 | 71 |
