Gene Information

Name : Shew_2316 (Shew_2316)
Accession : YP_001094441.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : scaffold protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0822
EC number : -
Position : 2712101 - 2712484 bp
Length : 384 bp
Strand : -
Note : TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: shm:Shewmr7_1820 FeS cluster assembly scaffold IscU

DNA sequence :
ATGGCTTACAGTGAAAAAGTAATAGATCATTATGAGAACCCGCGTAACGTAGGTTCATTCGACAAGAACGACCCTTCAGT
GGTTACCGGTATGGTAGGTGCGCCTGCCTGTGGTGACGTTATGAAGCTTCAGCTGAAGATCGACGACAACGGTATCATCG
AAGATGCCAAGTTCAAGACTTACGGCTGTGGTAGCGCTATCGCGTCAAGCTCTCTGGTCACCGAGTGGGTGAAGGGCAAG
ACGATTGAAGAAGCGCAAGCGATTAAAAATACGGATATTGCTGAAGAGCTTGCCCTACCGCCTGTTAAAATCCACTGCTC
AATCTTGGCTGAAGACGCCATCAAGGCAGCGTTAGACGAGTACAAGGCTAAGCACGAAAAGTAA

Protein sequence :
MAYSEKVIDHYENPRNVGSFDKNDPSVVTGMVGAPACGDVMKLQLKIDDNGIIEDAKFKTYGCGSAIASSSLVTEWVKGK
TIEEAQAIKNTDIAEELALPPVKIHCSILAEDAIKAALDEYKAKHEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iscU AAT96059.1 IscU Not tested T-PAI Protein 2e-45 79