Gene Information

Name : Shew_2318 (Shew_2318)
Accession : YP_001094443.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : BadM/Rrf2 family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1959
EC number : -
Position : 2713813 - 2714274 bp
Length : 462 bp
Strand : -
Note : TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: shm:Shewmr7_1818 transcriptional regulator, BadM/Rrf2 family

DNA sequence :
ATGAAACTAACTTCAAAAGGTCGGTATGCGGTAACGGCAATGTTAGACGTTGCAATGCATTCTACTTCTGGCCCGGTCCC
ATTAGCTGACATCTCCGAGCGTCAGGGAATCTCCCTTTCCTATCTTGAACAACTCTTCGCTAAATTACGTAAGCATGGTT
TAGTCTCCAGCGTCAGAGGACCTGGTGGCGGTTATCGTCTCGGTTTCGACGCCAGCGATATTTCCGTGGGCATGGTGGTT
AGGGCGGTAGATGAGTCGGTCGACGCCACACGTTGTCAAGGTTTGGGAAATTGTCAGAGCGGTACTCGATGTTTAACCCA
TTCGCTCTGGGGCGATTTGAGCAAACAGATTTCAGATTTTTTAAATGGCATTAGCCTTGCGGGTCTGATGAACAAGCGAG
ATGTGCAATTTATCTCAATCAAGCAAGACAAGATGCAACAGGAACAAAGGGTAACCCTGTAA

Protein sequence :
MKLTSKGRYAVTAMLDVAMHSTSGPVPLADISERQGISLSYLEQLFAKLRKHGLVSSVRGPGGGYRLGFDASDISVGMVV
RAVDESVDATRCQGLGNCQSGTRCLTHSLWGDLSKQISDFLNGISLAGLMNKRDVQFISIKQDKMQQEQRVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96061.1 rrf2 family protein Not tested T-PAI Protein 2e-47 70