Gene Information

Name : Shew_2490 (Shew_2490)
Accession : YP_001094615.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : anion transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0471
EC number : -
Position : 2929103 - 2930494 bp
Length : 1392 bp
Strand : +
Note : TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: shm:Shewmr7_3574 anion transporter

DNA sequence :
ATGTCCCTCGACACCACACAAGAGGCGATCGCCGCACCGCCAAAGCAGGCAGCCCAAACCAACTTGCCGATTCTATTTGG
CGATATAGTGCTGTTTGCCTTGCTCTATAACTTTCTGCCTTTCGAGCCAGGGGTGAATACCGGCATCGCTATTCTCGTCT
TCGCCGCCGTACTCTGGCTGACCGAAGCAATTCACATCAGCGTCACCGCCATACTGATCCCTATCATGGGCGTCTTGCTG
GGAGTTTTTGAAACCAAGGCGGCCATGAGCAACTTCGCCAATCCTATCATCTATCTCTTCTTCGGTGGCTTCGTGCTGGC
CGCGGCCCTCAACCATCAGGGCATTGATAGACGTATCGCCCAAAAGGTATTGACCGCCTCCAAGGGCAAACTCAGTATCG
CCTGCATGCTGCTGTTTGGGATCACAGCGCTACTCTCCATGTGGATCAGCAACACGGCCACGGCGGCCATGATGCTGCCT
CTGGCCCTTGGGATCCTCAGGCAACTGGATTTCAAGGAGCACAGAAGCACCTATCTCTTCATGCTGCTGGGCATCGCCTA
CTCCGCCAACATTGGCGGCATAGGCACCCTGGTGGGCAGCCCGCCGAACGCGATTGCCGCAGCCCAGGTCGGCCTGAGTT
TCGCCGACTGGCTAGAGTTTGGCCTGCTTACCGTGGCCCTCATGCTGCCTAGCATGTTGATTGCGCTCTATATCTACCTA
AAACCCAACCTCAATGTGGTGTGTGAGATCCCTAAGAGCAACGAACAACTCGCCCTGCAGGGTAAGCTCACCTTGCTTAT
CTTCCTTACCACTGTGTGCTGCTGGATCTTCAGCAAGCCTATCTCCAACGCACTGGGGGGAATTAAACAGTTCGACACCA
TAGTGGCACTGGGTTCAGTCGTCATGCTAGCCGGGCTTGGTCTGGTCGACTGGAAGAAGATTGAGAAAACCACTGACTGG
GGCGTGCTGATCCTCTTCGGTGGCGGCCTCACGCTCAGCGCCATCCTCAAAACCACGGGCACCAGCGTCTTCCTGGCCCA
TTGGGTCACCGATATCTTCGGCAATACCCATATGGCGCTGTTTACCTTTGCGGTGATCTTCTTCGTGGTGATGCTTACCG
AATTTGCCAGTAACACCGCCAGCGCCGCCCTCCTGGTGCCTGTGTTTGCCGCCATCGCCGAGGCGTTAGGCCTGTCACCC
GTGATGCTCTCTGTGCTCATAGGTATCGCAGCGTCCTGCGCCTTTATGTTACCGGTTGCCACACCGCCAAACGCCATCGT
TTACGGCTCTGGCTTTATCAAGCAATCTGAGATGATGCGCGCCGGGGTGATCATCAACTTCATCAGTATGTTGGCGCTCT
ATGTAATCGCCCATCTGTTCTGGACCATCTAA

Protein sequence :
MSLDTTQEAIAAPPKQAAQTNLPILFGDIVLFALLYNFLPFEPGVNTGIAILVFAAVLWLTEAIHISVTAILIPIMGVLL
GVFETKAAMSNFANPIIYLFFGGFVLAAALNHQGIDRRIAQKVLTASKGKLSIACMLLFGITALLSMWISNTATAAMMLP
LALGILRQLDFKEHRSTYLFMLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFADWLEFGLLTVALMLPSMLIALYIYL
KPNLNVVCEIPKSNEQLALQGKLTLLIFLTTVCCWIFSKPISNALGGIKQFDTIVALGSVVMLAGLGLVDWKKIEKTTDW
GVLILFGGGLTLSAILKTTGTSVFLAHWVTDIFGNTHMALFTFAVIFFVVMLTEFASNTASAALLVPVFAAIAEALGLSP
VMLSVLIGIAASCAFMLPVATPPNAIVYGSGFIKQSEMMRAGVIINFISMLALYVIAHLFWTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf77 AAO17231.1 Orf77 Not tested tcd island Protein 2e-103 55