Gene Information

Name : Shew_0419 (Shew_0419)
Accession : YP_001092550.1
Strain : Shewanella loihica PV-4
Genome accession: NC_009092
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 472828 - 473838 bp
Length : 1011 bp
Strand : +
Note : catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate

DNA sequence :
ATGACAATCAAAGTGGGAATTAACGGCTTTGGCCGCATGGGACGCCTGGCGCTGCGCGCCGCTTGGGAGTGGGACGATAT
CGAGTTTGTGCAGATCAACGACCCGGCGGGCGATGCCGCCACCCTGGCGCATCTGCTGACCTTCGACTCCATCCATGGCC
GCTGGAACCATGATGCCGTCGCCGAGGGCGAGCAGATCATCATAGGTGACAAGCGCATCAACACCAGTGCCAACCGCGCC
ATCGGCGACACCGATTGGTCTGGCTGTGACCTGGTGATCGAGGCCTCAGGGGTGATGAAGACTAAGGCGCTGCTGCAGGC
CTATCTGGATCAAGGCGTGAAGCGTGTGGTGGTGACCGCGCCGGTGAAGGAAGAGGGCGTACTTAACATCGTCATGGGGG
TTAACCATCAGCTGTATGATAAGGACAAATATCCTATCGTCACCGCGGCATCCTGCACTACCAACTGTCTGGCGCCTGTG
GTGAAGGTGCTGCACGAGCAGATCGGCATCAAGCATGGCTCCATGACGACCATTCACGACATCACCAATACTCAGACCAT
CTTAGATGCGCCCCATAAGGATCTGCGCCGTGCCCGCGCCTGCGGCCAGTCACTGATCCCCACCACCACGGGCTCGGCTA
CTGCAATTACCCACATCTTCCCCGAGCTGAAGGGTAAGTTAAACGGCCATGCGGTGCGTGTGCCCCTGGCAAATGCTTCC
ATCACAGACTGTGTGTTTGAGATGCAACGCCCGGTGACCGAGCAGGAGGTCAACGCCCTGTTTAAGGCGGCTGCCGAAGG
TGAACTTAAAGATATTCTCGGCTACGAGGAGCGCCCGCTGGTCTCTGTGGATTACAAGACAGATCCCCGCTCCAGCATAG
TCGATGCCCTGTCGACCATGGTGATCAACGGCACTCAACTCAAGCTCTACGTCTGGTACGACAACGAGTGGGGCTATGCC
AACCGCACCGCCGAACTGGCGCGTATGGTCGGCCGCATGGATAAGGCCTAA

Protein sequence :
MTIKVGINGFGRMGRLALRAAWEWDDIEFVQINDPAGDAATLAHLLTFDSIHGRWNHDAVAEGEQIIIGDKRINTSANRA
IGDTDWSGCDLVIEASGVMKTKALLQAYLDQGVKRVVVTAPVKEEGVLNIVMGVNHQLYDKDKYPIVTAASCTTNCLAPV
VKVLHEQIGIKHGSMTTIHDITNTQTILDAPHKDLRRARACGQSLIPTTTGSATAITHIFPELKGKLNGHAVRVPLANAS
ITDCVFEMQRPVTEQEVNALFKAAAEGELKDILGYEERPLVSVDYKTDPRSSIVDALSTMVINGTQLKLYVWYDNEWGYA
NRTAELARMVGRMDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 9e-51 42