Gene Information

Name : rnhA (HEAR2319)
Accession : YP_001100572.1
Strain : Herminiimonas arsenicoxydans
Genome accession: NC_009138
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2303489 - 2303929 bp
Length : 441 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGGAAAAAATTGATATCTTTACCGACGGCGCGTGCAAGGGCAATCCCGGCCGCGGCGGTTGGGGTGCGCTGCTTGTCAT
GGGCGAGCGCGAGAAGGAATTGTTCGGCGGCGAACCCGGCACCACCAATAACCGGATGGAACTGAAAGCAGTGATTGAAG
CATTGAATGCCTTGACGCGCCCATGCGAAGTGATAGTGCATACCGATAGCCAGTATGTGCAAAAAGGCATCAGCGAATGG
ATACATGGCTGGAAGGCGCGCGGCTGGAAAACTGCCGCCAGGGCGCCGGTCAAGAATGTCGATTTGTGGCAGGCGCTGGA
CGCCGCGCAGGCCAGACACCAGATCGAATGGCGCTGGGTGCGCGGTCATAATGGTCACGTCGGCAATGAGCGCGCAGATG
CGCTCGCCAATCGGGGCGTCGAGACGGTGAACTCAAATTAA

Protein sequence :
MEKIDIFTDGACKGNPGRGGWGALLVMGEREKELFGGEPGTTNNRMELKAVIEALNALTRPCEVIVHTDSQYVQKGISEW
IHGWKARGWKTAARAPVKNVDLWQALDAAQARHQIEWRWVRGHNGHVGNERADALANRGVETVNSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 6e-37 56