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Name : glcD (HEAR0284) Accession : YP_001098640.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit glcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 277782 - 279320 bp Length : 1539 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183; Product type e : enzyme DNA sequence : GTGTTATTCGATAGTGCAATGGACGCAGGATTGATAATGAATACGATTTCGGCAGCACCCGCTTCTACAGCGCCTTTTAC GGCAGCGCATCAACGCACGGTGGTGGACGCCTTGCGCGCCGTACTACCGGAGCAGTGCGTGCTCTTCAATGAAGAAGATA CGCGCCCCTACGAATGCGACGGCTTGGCAGCGTACGCCCAGTTGCCGATGGTGGTAGTGTTGCCGCTGAATGAAGCGCAT GTCATTGCCGTGCTTAAAGTCTGCCGCGATCTGAGCGTGCGTGTCGTACCGCGTGGCGCCGGTACCGGTTTGTCCGGCGG CGCGCTGCCAATCGCCGATGGCATCGTGCTGTCGACTGCGCGTCTGAACAAGATCGTCAAGGTCGATGCCTATGCGCGCA CGGCGGTGGTGCAGCCGGGTGTACGCAATCTGGCCATCTCCGAAGCGGTCGCTTCCCTCGGACTGTATTACGCTCCTGAT CCTTCTTCACAGATTGCCTGCACGATAGGCGGCAACGTTGCGGAAAACTCCGGTGGCGTGCACTGTCTCAAATATGGTTT GACCGTACACAACGTGATGCGCGTGCGCGTGGTTACGATCGAAGGCGATGTGATCGAGCTTGGCAACGCCGCTCTCGATG CGCCCGGACTGGACTTGCTGTCGGTATTTGTCGGTTCGGAAGGCATGCTCGGCATCGTTACCGAAGTCACTGTCAAGCTG ATTCCGAAACCGAAACTGGCACGCGTCATCCTGGCGTCGTTCGACGACGTGGTCAAGGGCGGTAATGCGGTGGCCAGCGT GATCGCCGCCGGCATTATTCCCGCCGGGCTGGAAATGATGGACAAGACCTCCACCCGCATGGTCGAGCCGTTCGTCAAAG CCGGTTACGACATCGATGCCGAAGCGATCTTGCTGTGCGAGTCGGATGGCATTCCGGAAGAAGTCGAGGAAGAAATCGCA CGCATGACGGAAGTGCTGAAACATTCGGGCGCAACGGCGATTGCCGTTTCGCAGGATGAGGCCGAGCGTCTGAAATTTTG GTCGGGACGCAAGAACGCATTTCCGGCGGCCGGCCGCATTTCTCCCGATTATTACTGCATCGATGGCACGATTCCGCGTC GTCGTCTGGCAGAAGTGCTGCAGGGCATTGCGCAAATGGAAGTCAAATACGGTTTGCGTTGCGCCAACGTGTTTCATGCC GGCGACGGCAATCTGCATCCCCTGATTTTATTCGATGCCAATCAGGAAGGCGAATTTCACCGTGCCGAATTGTTCGGCGC TGAAATTCTGGAAATGTGCGTGGCCTTCGGCGGTACGATTACCGGCGAGCATGGCGTAGGCCTGGAAAAAATCAACCAGA TGTGCGTACAGTTTTCACGCGCGGAAATGGATGCATTTCTCAGCGTCAAGCGCGCCTTCGATCCGCTGTCGCTGCTGAAT CCGGACAAGGCTATTCCGACGCTGCAGCGCTGTGCCGAGTACGGCAAGATGCACGTCAAGCGCGGCATGCTGAAATTTCC GGATTTACCACGCTTCTAA Protein sequence : MLFDSAMDAGLIMNTISAAPASTAPFTAAHQRTVVDALRAVLPEQCVLFNEEDTRPYECDGLAAYAQLPMVVVLPLNEAH VIAVLKVCRDLSVRVVPRGAGTGLSGGALPIADGIVLSTARLNKIVKVDAYARTAVVQPGVRNLAISEAVASLGLYYAPD PSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRVRVVTIEGDVIELGNAALDAPGLDLLSVFVGSEGMLGIVTEVTVKL IPKPKLARVILASFDDVVKGGNAVASVIAAGIIPAGLEMMDKTSTRMVEPFVKAGYDIDAEAILLCESDGIPEEVEEEIA RMTEVLKHSGATAIAVSQDEAERLKFWSGRKNAFPAAGRISPDYYCIDGTIPRRRLAEVLQGIAQMEVKYGLRCANVFHA GDGNLHPLILFDANQEGEFHRAELFGAEILEMCVAFGGTITGEHGVGLEKINQMCVQFSRAEMDAFLSVKRAFDPLSLLN PDKAIPTLQRCAEYGKMHVKRGMLKFPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-155 | 63 |
