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Name : HEAR0306 (HEAR0306) Accession : YP_001098661.1 Strain : Herminiimonas arsenicoxydans Genome accession: NC_009138 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 300843 - 302702 bp Length : 1860 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGAATCGCTATCCCCTCTGGAAGTACATTACGATCGTCATCGCCCTGCTGTTGGGTGCGTTGTACACGATACCGAACTT CTTCGGTGAGTCGCCGGCTGTGCAAATCAGCAGCGCCAAAGCCACTGTCAAGGTAGACAGCTCCCTGATGACGCAGGTTG AGCAAGTGCTGCAAAAGGCAGGCCTCCAGTCCGATGGGATGGTGTACGAAACGATAGGCACGCAAGGCACGGTGCGCGTG CGTTTCCCGAATACCGATGTCCAGTTCAAGGCCAAGGGTCTGCTCGAAGCGAATCTGAATCTTGATCCGGCCGATCCAAC CTATCTGGTCGCATTCAATCTGTTGCCGAATACGCCCGCATGGCTGCAAAGCCTGCACGCAGCGCCCATGTATCTGGGCC TTGATCTGCGCGGTGGCGTGCACTTCCTGATGCAGGTCGATACCAAGGCTGTCATGAACAAGCGCGTGCTCGGCTTGCAG GCCAGCGCGCGGGCTATCTTGCGTGACAAGAACGTACGTCATGCCGGCATTGCCCGCAATGGCGACAACATCGAGATATT GTTCCGTGATGCTGAAACCCGTTCCAAGGCGCGTACTGCGCTGGGCGATGAATTGCGCGAGCTGCTGCTGACCGATGCAG GCAGCGGCGATGAGCTCAAACTGGTAGGTGCGCTGCAACCGGCGGCATTGAAGCAGACGGTGGAAGACGCAGTACAGCAA AACATCACCACCTTGTCCAAGCGGGTGAATGAACTGGGCGTGGCCGAGCCATTGATCCAGCGTCAGGGCGCCGACCGCAT CGTGGTGCAGTTGCCAGGGGTGCAGGACGTTTCGCGCGCCAAGGACATCATCGGTAAAACAGCAACGCTGGAAGTGCGTC TGGTAGATGAAACCGTCACGCGCGGCACTGAAGACACGGCGACGATTCCATTCGGCTCCGAGCTCTTCAAGGTTGGCAAG AATGCACCTGTGGTCTTGTACAAGGATCCGATCATCACTGGTGAATACATTTCCAGCGCATCGGCCAGTTTCGATCAGAA TCAGCAGCCTTCCGTCAGCATCGATTTGAACGGCGACGGTGGTCGCCGCATGCGTGAAGCAACGCGTACCCGCGTCGGCA AGGCCATGGCGATCGTGCTGTTCGAGAAAAACAAGGGTGAAGTGCTGACGGTCGCAACCATACGTGACGAATTGGGCGCT CGCTTCCAGATTACCGGCATGGGTTCGTCTGAAGCCGCCAGCGATCTGGCCCTGCTGTTGCGTGCCGGCTCGCTGGCCGC ACCGATGGAAATCATCGAAGAACGGACAATCGGACCGCAACTCGGTGCAGAGAACATCAAGAAAGGTTTTGATGCAACGC TGTACGGCTTTATCGGCATTGCGATCTTCATGATCATCTATTACCGCGCATTCGGCTTCTTCAGTGTGTTTGCATTGGCG GTCAACGTGATGTTGCTGATTGCATTGTTGTCGATGCTGCAGGCGACGCTGACGCTGCCGGGTATCGCCGCGATTGCGCT GACGCTCGGTATGGCGATCGATGCCAACGTGCTGATCAATGAGCGGATACGGGAAGAATTGCGTGCCGGACATTCGCCGC AGACAGCTATTGCGATGGGCTTTGAGCGGGCATGGGCGACGATTCTCGATTCCAACGTGACGACTCTGATTGCCGGCCTG GCCTTGCTGATTTTCGGCTCCGGTGCAGTGCGCGGCTTTGCCGTCGTGCATTGTCTCGGTATTCTGACCTCGATTTTCTC TGCCGTATTCGTATCGCGCGGTGTCGTCAATCTCTGGTACGGCCGCAAGAAAAAACTGACATCGATCTCTATCGGCCAGG TCTGGAAACCCACCGACTGA Protein sequence : MNRYPLWKYITIVIALLLGALYTIPNFFGESPAVQISSAKATVKVDSSLMTQVEQVLQKAGLQSDGMVYETIGTQGTVRV RFPNTDVQFKAKGLLEANLNLDPADPTYLVAFNLLPNTPAWLQSLHAAPMYLGLDLRGGVHFLMQVDTKAVMNKRVLGLQ ASARAILRDKNVRHAGIARNGDNIEILFRDAETRSKARTALGDELRELLLTDAGSGDELKLVGALQPAALKQTVEDAVQQ NITTLSKRVNELGVAEPLIQRQGADRIVVQLPGVQDVSRAKDIIGKTATLEVRLVDETVTRGTEDTATIPFGSELFKVGK NAPVVLYKDPIITGEYISSASASFDQNQQPSVSIDLNGDGGRRMREATRTRVGKAMAIVLFEKNKGEVLTVATIRDELGA RFQITGMGSSEAASDLALLLRAGSLAAPMEIIEERTIGPQLGAENIKKGFDATLYGFIGIAIFMIIYYRAFGFFSVFALA VNVMLLIALLSMLQATLTLPGIAAIALTLGMAIDANVLINERIREELRAGHSPQTAIAMGFERAWATILDSNVTTLIAGL ALLIFGSGAVRGFAVVHCLGILTSIFSAVFVSRGVVNLWYGRKKKLTSISIGQVWKPTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
