|
Name : SACE_6384 (SACE_6384) Accession : YP_001108479.1 Strain : Saccharopolyspora erythraea NRRL 2338 Genome accession: NC_009142 Putative virulence/resistance : Virulence Product : ABC transporter protein, ATP-binding component Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 7151378 - 7155091 bp Length : 3714 bp Strand : + Note : - DNA sequence : GTGAGCGACTCCCCCAGACCCGCCAACGGCGGTTGGATCCGCCGGCTCGCGGCCGCCTGCTGGCGCCACCCCGTATCGGC GACGCTGGCCATCACCGCGTCGGTCACCGCCGTCGGCCTGGAAGCGCTGGTGCCGCTGCTGACCAAGGTCGCGGTGGACG ACGCGGTCGCGGGCACGACGGCGCGCCTCTGGTGGGTCGTGGCCGGACTGCTCGGGCTGGGGCTGTTCCGCTTCGCCGCC GCGTTCGTGCGCCGCTACAGCGCGGGCCGCCTCGCCCTGGACGTGCAGCACGACCTGCGCCGCGCGGTGTTCGCGTCGGT GCAGCGGCTCGACGGCGGCAAGCAGGACGCGCTGCGCACCGGCCAGGTGGTGTCGCGCTCGATCACCGACCTGCAACTGG TCAACGGACTCCTGTCGATGTTCCCGCTCGCCGCGGGCACCGTGGTGCTCGCGCTGTTCGCGATCGGGGCGATGCTGTGG CTGTCGCCGCTGCTGACGGTGGTGGCGCTGGTCATCACGCCGCTGATCGCGGTGGTGTCGGCGCGCAGCAAGAAGCGGCT CTACCTGGCGACGTGGTCGGCCCAGCAGCGCGCCGCCGACATCGCCCAGCACGTCGAGGAGTCCGTCACCGGCGTCCGGG TGGTGAAGGGCTTCGGCCAGGAGGCCCGCGAGGTGGCGCGGCTGGAGAGCGGTGCGCGCAGGCTGTTCGCCGAGCGGCTG CGCAGCGCCCGCCTGACCTCGCTGCCACAGGCGACGCTGACCGCGCTGCCGGTCTCCGGGCAGGTCGGGGTGCTCGGCCT CGGCGGCTGGATGGTGGTGCAGGGCCAGGTGAGCATCGGCACCTTCGTGGCCTTCGCCGGGTACGTGACGATGCTGGCCG GGCCCGCCCGGATGATCGCGAGCACGGTGATCCAGGGGCAGCTCGTGCGCGCCGGCGCCGAGCGGATCAACGAGCTGATC GACTCGCAGCCGGAGGTGCAGGACAAGCCGGACGCGGTCGCGCTGCCGGACGGTCCGCTGGAGGTGGAGCTCGACGGCGT CGGTTTCGGCTACAGCCGCACCCAGCCGGTGCTGCGCGACGCGACGCTGCGCGTGCGTCCGGGCGAGACGGTCGCGCTGG TCGGTCCGGCCGGTTCGGGCAAGTCGACGGTGTCGATGCTGTTGCCTCGCTTCTACGATGTGCACGAGGGCGCGGTGCGG ATCGGCCGGGTGGGCGAGGAGCCGCTCGACATCCGCGACCTGCGGCTGGACTCGCTGCGCTCGGCGGTGGGAGTGGTGTT CGAGGAAGCGTTCCTGTTCTCCGACACCATCCGAGGCAACATCGCCTACGGCATGCCCGACGCGTCCGACGAGGCGGTGA TCGCAGCCGCTCGGGCGGCCGAGGCGCACGACTTCATCAGCGCGCTTCCCGACGGCTACGCCACGCTGGTCGGCGAGCGC GGACTGACCCTCTCCGGCGGCCAGCGGCAACGGGTCGCGCTGGCCAGGGCGTTGCTGTCGGACCCGCGCATCCTGGTGCT CGACGACGCGACCTCGGCGGTGGACCCGACCACGGAGGCCGCCATCCACGACACGCTGCGCTCGGTGACCGCCCAGCGCA CGACGCTGCTGGTCGCGCACCGCCGCTCGACGCTGGCGCTGGCCGACCGGATCGCGGTGCTCGACGAGGGCCGGGTCGTC GACATCGGCACCCAGGAGGAGCTGGAGGAGCGTTGCGAGCTTTTCCGCTCGCTGCTGGCCGGGCCCGGCGAGTCGATCGA CAACCGCTGCGACCGGGCGGACGGCGGCGAGGGCATCACCCCGGAGCTGTGGCCGCAGGTCGAGCGCGACGAGCTCGTCG CGGACGCCTCCGGCGGCACACCGCCCACCCCGGAGCTGATCGAGGGGCTGCGCAAGCTGCCCGCGGCAACCGCCCAGCCC CGGCTGCCCGGCGTGGACCCGACCGCGCCGGACCCGGAGTTCCGGCTGGCCCGGCTGTTCCGGCCGATCCGCTGGGGTCT GGTGCTGACCGTACTGCTGGTCGCCGCCGACGCGGCGGCGCTGATCGCGCTGCCGACGCTGGTCCGCCAGGGCGTCGACG GCGGTGTGGTCGCGGGCGACCTGGGGGCGCTGTGGACGGCGACCGCGGTGGCCGCGGCCGTGGTCGCGGCGGGCTGGCTG GTCGTGAAGGTGCAGACCGTGGTGACCGCGCGGACCGGCGAGACCCTGCTCTACCTGCTGCGGCTGCGCAGCTTCGCGCA CCTGCAACGGCTCGGGCTCGACTACTACGAGCGCGAGCTCGGCGGCCGGATCATGACCCGGATGACCACCGACGTCGACG CCCTGTCGACGTTCCTGCAAACCGGACTGGCCACCGCGGTGGTCAGCGTGCTGACCATCGCCGGCATCGCCGTCACCCTG CTGGTCACCGACTTCTCACTGGCACTGGTGGCGTTGTCGGTGCTGCCTGTGCTGGTGGTGGCCACGGTGATCTTCCGGCG GGTCTCCTCGGTGGCCTACGCCGAGGCCCGCGAGCGGGTCAGCACGGTCAACGCCGACATGCAGGAGAACGTCTCCGGGC TGCGGGTCGCCCAGGCCCACCGCCGGGAGCGGCACTCGGCGAAGGTCTTCGCCCGCCGCAGCGACGCCTACCGCCGCTCG CGGCTTCGCGCGCAGCGCTACATCGCGACCTACTTCCCGTTCGTCGCGCTGCTGTCGGAGGCCGCGCAGGCCATGGTGCT GGGCGTGGGAGCGTCCCGGGTCGCCGCGGGCGGTCTCTCGGCAGGCGTGCTGGTCGCGTTCCTGCTGTACCTGGGGCTGT TCTTCTCCCCGGTCCAGCAGCTCTCCAGCGTCTTCGACGGCTACCAGCAGGCGCGGGTCGGCCTGCGCCGCATCGGCGAC CTGCTGCGCACGCCGACGTCGGTGCCGCAGGCGGCCGAGCCGGTCGCGGTGCCCGAGCGGCTGACCGGCGAGGTCGAGCT GCGCTCGGTGACCTTCCGCTACCCCGGCACCGAGCGGCCCGCGCTGCACGACGTCTCGCTGCGGGTCGCCCCCGGCGAGA CCGTCGCGCTGGTCGGCGCCACCGGCGCGGGCAAGTCGACGCTGGTCAAGCTCCTCGCCCGGTTCTACGACGTCACCGAG GGCGCGGTGCTGGTCGACGGGGTCGACGTGCGCTCCTACGACCTGACCGGCTTCCACCACCGGCTGGCGGTGGTCCCGCA GGAGGGCCACCTGTTCACCGGGGACATCGCAGCCAACATCGCCTACGGGCGGCCCGGCGCCGAGCCGGAGGAGATCGAGG CCGCCGCGCGCTCGGTCGGCGCGCTGCCCGGGATCGCGATGCTGCCGGACGGGTTCCGCCAGCAGGTCGGCGAGCGCGGG CGGGGGCTGTCGGCGGGGCAGCGCCAGCTCGTCGCGCTCGCCCGCGCCGAACTGGTCTCCCCCGACCTGCTGCTGCTCGA CGAGGCCACCGCCGCGCTGGACCCGGCGACCGAGTCGATGGTGGTGACCGCCAGCGATCAGCTCGCGGCCAAGCGGACCA CGTTCGTCGTGGCGCACCGGCTTGCCACGGCGGCCCGCGCCGACCGGATCGTCGTGGTCGACGGCGGCCGCATCGCGGAG GAGGGCACCCACGAGGAGCTGCTGGCGCTCGGCGGTCGCTACCGGCAGTTGTGGAACGACACCGGCACCGAACGCGCAGG AGCGGTTCCGCAGAGTCACCACCCGCCCGGATGA Protein sequence : MSDSPRPANGGWIRRLAAACWRHPVSATLAITASVTAVGLEALVPLLTKVAVDDAVAGTTARLWWVVAGLLGLGLFRFAA AFVRRYSAGRLALDVQHDLRRAVFASVQRLDGGKQDALRTGQVVSRSITDLQLVNGLLSMFPLAAGTVVLALFAIGAMLW LSPLLTVVALVITPLIAVVSARSKKRLYLATWSAQQRAADIAQHVEESVTGVRVVKGFGQEAREVARLESGARRLFAERL RSARLTSLPQATLTALPVSGQVGVLGLGGWMVVQGQVSIGTFVAFAGYVTMLAGPARMIASTVIQGQLVRAGAERINELI DSQPEVQDKPDAVALPDGPLEVELDGVGFGYSRTQPVLRDATLRVRPGETVALVGPAGSGKSTVSMLLPRFYDVHEGAVR IGRVGEEPLDIRDLRLDSLRSAVGVVFEEAFLFSDTIRGNIAYGMPDASDEAVIAAARAAEAHDFISALPDGYATLVGER GLTLSGGQRQRVALARALLSDPRILVLDDATSAVDPTTEAAIHDTLRSVTAQRTTLLVAHRRSTLALADRIAVLDEGRVV DIGTQEELEERCELFRSLLAGPGESIDNRCDRADGGEGITPELWPQVERDELVADASGGTPPTPELIEGLRKLPAATAQP RLPGVDPTAPDPEFRLARLFRPIRWGLVLTVLLVAADAAALIALPTLVRQGVDGGVVAGDLGALWTATAVAAAVVAAGWL VVKVQTVVTARTGETLLYLLRLRSFAHLQRLGLDYYERELGGRIMTRMTTDVDALSTFLQTGLATAVVSVLTIAGIAVTL LVTDFSLALVALSVLPVLVVATVIFRRVSSVAYAEARERVSTVNADMQENVSGLRVAQAHRRERHSAKVFARRSDAYRRS RLRAQRYIATYFPFVALLSEAAQAMVLGVGASRVAAGGLSAGVLVAFLLYLGLFFSPVQQLSSVFDGYQQARVGLRRIGD LLRTPTSVPQAAEPVAVPERLTGEVELRSVTFRYPGTERPALHDVSLRVAPGETVALVGATGAGKSTLVKLLARFYDVTE GAVLVDGVDVRSYDLTGFHHRLAVVPQEGHLFTGDIAANIAYGRPGAEPEEIEAAARSVGALPGIAMLPDGFRQQVGERG RGLSAGQRQLVALARAELVSPDLLLLDEATAALDPATESMVVTASDQLAAKRTTFVVAHRLATAARADRIVVVDGGRIAE EGTHEELLALGGRYRQLWNDTGTERAGAVPQSHHPPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 8e-156 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SACE_6384 | YP_001108479.1 | ABC transporter protein, ATP-binding component | VFG1653 | Protein | 5e-156 | 43 |
