Gene Information

Name : Dred_3277 (Dred_3277)
Accession : YP_001114602.1
Strain : Desulfotomaculum reducens MI-1
Genome accession: NC_009253
Putative virulence/resistance : Virulence
Product : glycyl-radical activating family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : -
Position : 3554748 - 3555704 bp
Length : 957 bp
Strand : -
Note : TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: dsy:DSY5005 pyruvate-formate lyase-activating enzyme

DNA sequence : 
ATGACTACTGATACTGGCAGTATCTTAGAAAGAAAAGCGAGAATCTTCAATGTCCAGAAATATTCCATCTATGATGGACC
GGGCGTTAGAACATTAATATTTTTCAAAGGGTGTCCCCTGAGATGCAAATGGTGTTCTAATCCCGAGGGACTTGAAAGAA
AATATCAAGTCATGTACAAAGAAGATTTGTGCATTAACTGTGGTAACTGTACTCATGTTTGTCCCGTCCAACTACATTAT
TTCCTGGATGAAGAAAGCCCCAGGCATAAAGTTAACAGAAGCATTGACTGTGTGGGCTGCCGAAAGTGTGAAACAGCTTG
TCCTAAACAGGCACTGTCCATTGTCGGCTCGGATAAAACCATTTCCGAAGTCTTGGAAATCATCCAACAAGATGTGCTCT
TCTACCACAGTTCAGGTGGAGGAGTCACTCTTGGGGGAGGCGAAGTCACGGCACAGCCGGAATTTGCCACCAACCTGCTG
ACGGAATGTAAAAGAATGGGGATCCACACAGCCATTGAAACTTCTGGATATGCAAAACTGGACTCCCTGCTTATGATAGC
CCAGTTTACTGATTTGTTTCTGTATGATATTAAGCATATAGATTCTGATCGACATTATGAACTTACGGGAGTGCGCAATG
AACGCATTCTGGATAACCTAACGGAACTTATACGACGTGGGTCTAATGTCAAGGTCAGGATGCCCCTTATCAGGGGATTA
AATGATGGCGAAGACACTATTCGCAGAACCCTGGAATTTCTACAAGACTTCAAGTACTACAAAAACTTTCTAGGCATTGA
CTTGCTTCCTTATCATAAATTGGGTATTAACAAATACAAGCAATTGGACATGAAATACGCCATTACTGAAGATTTGAGTT
TCAAAGAAGAAGAGTTGGATAAAATTGAAGAGTTTATAAAAGGTTATGACTTACAAGTGGAAGTCATCAGGCATTAA

Protein sequence : 
MTTDTGSILERKARIFNVQKYSIYDGPGVRTLIFFKGCPLRCKWCSNPEGLERKYQVMYKEDLCINCGNCTHVCPVQLHY
FLDEESPRHKVNRSIDCVGCRKCETACPKQALSIVGSDKTISEVLEIIQQDVLFYHSSGGGVTLGGGEVTAQPEFATNLL
TECKRMGIHTAIETSGYAKLDSLLMIAQFTDLFLYDIKHIDSDRHYELTGVRNERILDNLTELIRRGSNVKVRMPLIRGL
NDGEDTIRRTLEFLQDFKYYKNFLGIDLLPYHKLGINKYKQLDMKYAITEDLSFKEEELDKIEEFIKGYDLQVEVIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 3e-73 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dred_3277 YP_001114602.1 glycyl-radical activating family protein VFG1591 Protein 2e-73 53