Gene Information

Name : Bcep1808_4920 (Bcep1808_4920)
Accession : YP_001117342.1
Strain :
Genome accession: NC_009255
Putative virulence/resistance : Unknown
Product : shikimate transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 1796829 - 1798136 bp
Length : 1308 bp
Strand : -
Note : TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_3805 metabolite/H+ symporter, major facilitator superfamily (MFS)

DNA sequence :
GTGACCCCAACTTTCGACACCCTCGACACCGCTGCCGGCGAGCGCGCCCGCAGCCAGGCCCGCAAGGCGGCGATCGGCAG
CTTTGTCGGCGCCGTCGTCGACTGGTACGACTTCCTGCTGTATGGAATCGTCGCCGCGCTGGTCTTCAATTCCGCGTTCT
TCCCGAAGGTCAGCCCGACGATGGGCACGCTCGCGGCGTTCGCGACCTTCGGCGTCGGCTTCCTGTTCCGCCCGCTCGGC
GGCGTCGTGTTCGGCCATTACGGCGACCGGCTCGGCCGCAAGCGGATGCTGGTGCTCACCGTGATGCTGATGGGGCTGTC
GACCGTCGCGATCGGCCTGCTGCCCGGCTTCGCGACGATCGGCTGGTGGGCGCCGGTGCTGCTCGTGACGATGCGCGCGA
TCCAGGGCTTCGCGGTCGGCGGCGAATGGGGCGGCGCGGCGCTGATGGCCGTCGAAAGCGCGCCGAAGCAGAAGAAGGCG
TTCTACAGCAGCGGCGTGCAGGTCGGCTACGGCGTCGGGCTGGTGCTGGCCACGGGCATCGTGTCGATCCTGAGCCACAC
GCTCGGCGACGCCGCGTTCAAGTCGTGGGGCTGGCGGCTGCCGTTCCTGTTCAGCATCGTGCTGGTTCTGATCGGACTGT
GGGTGCGCAAGAGCATGGACGAGTCGCAGGAGTTCGTCGAGAAGGTCGAGCACGGCAACCGCAAGCTGCGCCTGCCGGTG
CTCGAAGCGCTGACGCGCCATCCGAAGGCGTTCCTGCTGATCGTCGCGCTGCGGCTGGCCGAGCTGTTCACGATGTACAT
CGTCACCGCGTTCGCGCTCAGCTATTCGACGTCGAACCTCGGCATGTCGCGCGACCTGTTCCTGAGCATCGGCCTGCTGG
TCGGCACGGTGAGCTGCGTGACGATCCCGAGCTTCGCGTGGCTCGCCGATCGCTTCGGCCTGCGCCGCATCTATCTGACC
GGCGCGCTGATCGGGCTCGCATCGGCGGTGCCGTTCTTCCTCGCGCTGGAGTCGCGCTCGGTCGCGTGGATCGTCGTGTT
CTCGATCCTGCTCGCCAATGCCGCGCACGACATGGTGGTCAGCGTCCAGCAGCCGCTCTTCACCGAGTTGTTCGGCGCCG
AGTACCGTTACAGCGGCGCGGGCGTCGGCTATCAGTTCGCGAGCGTCGTCGGCGGCGGCTTCACGCCGTTCATCGCGGTG
GCGCTGGTCAGCTTCGCGGGCGGCGCGTGGCATCTCGTCGCCGGCTATCTCGCCGTGGGTTGCCTGATCTCGCTGGTCGT
CGCCGCGCGGATGCGGGTGACCCAATGA

Protein sequence :
MTPTFDTLDTAAGERARSQARKAAIGSFVGAVVDWYDFLLYGIVAALVFNSAFFPKVSPTMGTLAAFATFGVGFLFRPLG
GVVFGHYGDRLGRKRMLVLTVMLMGLSTVAIGLLPGFATIGWWAPVLLVTMRAIQGFAVGGEWGGAALMAVESAPKQKKA
FYSSGVQVGYGVGLVLATGIVSILSHTLGDAAFKSWGWRLPFLFSIVLVLIGLWVRKSMDESQEFVEKVEHGNRKLRLPV
LEALTRHPKAFLLIVALRLAELFTMYIVTAFALSYSTSNLGMSRDLFLSIGLLVGTVSCVTIPSFAWLADRFGLRRIYLT
GALIGLASAVPFFLALESRSVAWIVVFSILLANAAHDMVVSVQQPLFTELFGAEYRYSGAGVGYQFASVVGGGFTPFIAV
ALVSFAGGAWHLVAGYLAVGCLISLVVAARMRVTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1067 YP_853084.1 shikimate transporter Not tested PAI IV APEC-O1 Protein 3e-139 71