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Name : secD (Bcep1808_0681) Accession : YP_001118528.1 Strain : Genome accession: NC_009256 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 747368 - 749389 bp Length : 2022 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTATCCAATCTGGAAATATGTCGTGATGGTCGTGGCGCTCGCCATCGGCTTTCTGTACACATTGCCCAACTT CTTCGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCCACGGTCAAGCTCGACTCGGCCACGCTGAGCCAGGTCG AAGCCGCGCTCGCGTCCGCACAGATCAAGCCGGACGACGTGACCTTCGAGAACACGGCGACCAACGCGAACATCCGCGTG CGCCTGAAGGACACCGATACGCAGCTGCGCGTCAAGGACCTGCTGCAGAAGTCGCTGAATACCGACCCGAACGATCCGCA GTACGTCGTCGCGCTGAACCTGCAGAGCGCGTCGCCGCGCTGGCTGACGGCCATCCACGCGCTGCCGATGTACCTCGGCC TCGACCTGCGCGGCGGCGTCCACTTCCTGCTGCAGGTCGACATGACCGGCGCGCTGACGAAGAAGCTCGACTCCGACGCG ACCGACGCGCGCGCCTTGCTGCGCGACAAGAACATCCGCGACGGCGGCGTGAGCCGCGTCGATCAGTCCGTCGTCGTGAA TTTCAGCGACGCGCAGACGGCCGAAGACGCGCTCAAGGCGCTCGCCGCGTCGATCACCGAACTGCAATGGGCGACCCAGC CGGGCGGCGGCGGCACGCAAGTGGTCGGCACCTTCACGCCGGCCGTGCAGAAGTCCGTCGAGGACGCCGCGCTCAAGCAG AACCTGACCACGCTGCACAATCGCGTGAACGAGCTCGGCGTGTCCGAGCCGATCCTGCAGCAGCAAGGCAGCGACCGCAT CGTCGTCGAGCTGCCGGGCGTGCAGGACACCGCGAAGGCGAAGGACATCATCGGCCGCACCGCGACGCTCGAGGCGCGCC TCGCCGATCCGATCAACACGCACCCGAACCCGAACGACCCAGTGCCGCCGGGCGAGGAACTGTTCACGCAGGGCAACCAG GCGCCCGTGCTGCTGAAGAAGGACGTGATCTTCACCGGCGACCGCATCATCGACGCGTCGGCCGGCTTCGACGAACACCA GCGTCCGTCGGTCAACATCCGTCTCGACTCGGCGGGCGGCCGCTCGGTGCGCGCGGTGTCGCGCGAGAACATCGGCAAGC CGATGGCGATGGTGCTGTTCGAGAAGGGCAAGGGCGAAGTGCTGACGGTCGCGACGATCCAGTCCGAACTCGGCGACCGC TTCCAGATCACCGGCCAGCCGACGCCGCAGGCCGCGGCTGACCTCGCGCTGCTGCTGCGCGCCGGCTCGCTCGCCGCACC GATGGACATCATCGAAGAACGCACGATCGGCCCGAGCCTCGGCGCGGACAACATCAAGATGGGCGTCCACTCGGTGATCT GGGGCTTCTGCGCGATCGCCGTGTTCATGGTCGCGTACTACATGCTGTTCGGCGTGATCTCGGTGATCGGCCTGTCGGTG AACCTGCTGCTGCTCGTCGCGGTGCTGTCGCTGATGCAGGCGACGCTGACGCTGCCGGGCATCGCGGCAATCGCGCTCGC GCTCGGCATGGCGATCGACTCGAACGTGCTGATCAACGAGCGCGTGCGTGAAGAACTGCGCGCCGGCCAGCCGCCGCAGC TCGCGATCCAGTCGGGCTACGCGCACGCCTGGGCGACGATTCTCGACTCCAACGTGACGACGCTGATCGCCGGCCTCGCG CTGCTCGCGTTCGGCTCGGGCCCGGTGCGCGCGTTCGCGATCGTGCACTGCCTCGGCATCCTGACGTCGATGTTCTCCGC GGTGTTCTTCTCGCGCGGGATCGTCAACCTCTGGTACGGCGGCCGCAAGAAGCTGAAGTCGCTCGCGATCGGCCAGGTGT GGAAGCCGGAAGGCGCGGCGGCCGGCGCGACGTTCGCGGCAGCCGACGAATCGACCGACACCGCGCGCGCCGCGAAGCTC GCCGCGCCCGCGAAAGGCAATGGGCCGCGCGCCGGCAAGCCGCAGTTGCGCAACCGCGCGCAGCCAGGCGTGCCGCCGAA GAAACCGGGCTCGACCCAATAA Protein sequence : MNRYPIWKYVVMVVALAIGFLYTLPNFFGEAPAVQVSSGKATVKLDSATLSQVEAALASAQIKPDDVTFENTATNANIRV RLKDTDTQLRVKDLLQKSLNTDPNDPQYVVALNLQSASPRWLTAIHALPMYLGLDLRGGVHFLLQVDMTGALTKKLDSDA TDARALLRDKNIRDGGVSRVDQSVVVNFSDAQTAEDALKALAASITELQWATQPGGGGTQVVGTFTPAVQKSVEDAALKQ NLTTLHNRVNELGVSEPILQQQGSDRIVVELPGVQDTAKAKDIIGRTATLEARLADPINTHPNPNDPVPPGEELFTQGNQ APVLLKKDVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRSVRAVSRENIGKPMAMVLFEKGKGEVLTVATIQSELGDR FQITGQPTPQAAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKMGVHSVIWGFCAIAVFMVAYYMLFGVISVIGLSV NLLLLVAVLSLMQATLTLPGIAAIALALGMAIDSNVLINERVREELRAGQPPQLAIQSGYAHAWATILDSNVTTLIAGLA LLAFGSGPVRAFAIVHCLGILTSMFSAVFFSRGIVNLWYGGRKKLKSLAIGQVWKPEGAAAGATFAAADESTDTARAAKL AAPAKGNGPRAGKPQLRNRAQPGVPPKKPGSTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-93 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-93 | 42 |
