Gene Information

Name : lolD (ASA_1884)
Accession : YP_001141707.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1996494 - 1997192 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGAACCCTTGTCTAGTGAACCTCTGCTGCGTTGTCAGGCCCTGAATCATGTTTATCAAGAGGGTGAGCTGGAGAT
CCAGGTTCTCAAGGGGATTGATCTGAGTGTGGCCCCCGGCGAGATGCTGGCGGTGGTGGGCAGCTCGGGATCGGGCAAGA
CCACCTTGCTGCATCTGATGGGGGCGCTCGACAACCCGTCAAGCGGCGCCGTGCTGTTCAAGGGGCAGGATATCCACCAC
TGGGATAGCCGTACTCAGGCGAGATTCCGCAACCAGGAGCTGGGATTTGTCTATCAGTTTCACCACTTGCTCGCCGAGTT
TACCGCGCTGGAGAACACCGCCATGCCGCTGCTTATTGCTGGTGAGTCGGTAGCCGTCGCCACCGACAAGGCGACTCGCA
TGCTGGGTCGGGTGGGGCTTTCCCATCGTCTCAACCACAGGCCATCCGAGCTGTCCGGTGGCGAACGCCAGCGGGTGGCC
ATTGCCCGCGCCCTGGTCAACGAGCCCAGCCTGGTACTGGCGGACGAGCCCACCGGCAACCTGGATCACGCCAGCGCCAC
TGCTGTTTACGAGCTGCTCTGTGAGCTCAATCGTGAGCTGGGCACTGCCTTCGTGGTAGTCACCCATGACCTGAGTCTGG
CCGCCAAGCTCCATCGGCGGGTCACCCTGGTGAGCGGCATCATGGCGGAGGTCGCCTGA

Protein sequence : 
MNEPLSSEPLLRCQALNHVYQEGELEIQVLKGIDLSVAPGEMLAVVGSSGSGKTTLLHLMGALDNPSSGAVLFKGQDIHH
WDSRTQARFRNQELGFVYQFHHLLAEFTALENTAMPLLIAGESVAVATDKATRMLGRVGLSHRLNHRPSELSGGERQRVA
IARALVNEPSLVLADEPTGNLDHASATAVYELLCELNRELGTAFVVVTHDLSLAAKLHRRVTLVSGIMAEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001141707.1 lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 3e-40 46
lolD YP_001141707.1 lipoprotein releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-35 44