Gene Information

Name : Pnuc_1280 (Pnuc_1280)
Accession : YP_001156058.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 1349165 - 1351378 bp
Length : 2214 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACTGCGCGCACTACCTGCAATAGCCTTCAAGTGGCAACCCCTCTATACCGTTTTATTGAAGACAAAGTCCTTCCAGG
AACTGGAATTAAGAGTGCTGACTTTTGGAAAGGCTTTGATGAAATTGTTAAAGACCTCACCCCTAAAAATGAAGCATTGC
TAGCTAAGCGCGATCGCATTCAGGTGGACTTGGATAAATGGCATCAAGCTAATCCTGGCCCAATTAAAGATATGCCTGCT
TATCGCAAGTTCCTAAAAGAAATTGGGTACTTAGATGATGTTCCAGGAAAAGTATTGGGCACTACCGAGAATGTGGATGA
TGAGTTGGCATTGCAAGCTGGCCCACAACTCGTGGTTCCAGTTCTCAACGCGCGTTATGCATTAAATGCGGCCAATGCTC
GTTGGGGTTCTTTATATGATGCTCTGTACGGCACTGACGTACTTTCTGAAGAAGACGGCGCTACAAAAGCGGGCGCATAC
AACCCAATACGTGGTGCGAAGGTTGTAGCCTTTGCTCGCAATTTCCTGGATCAGTCCGCCCCTTTGGCTAAAGGCTCTCA
TCGCGATGCCGTTTCATATACGGTTGATGGCAATAAATTATCAATCAAGCTCAAGGATGGCAGCACAACAGGCCTGGCAG
ATGAGAAACAATTCGTAGGCTACCAGGGCGATGCGGCTGCGCCCAGCTCAATTTTGTTGCGCAATAACGGTGTGCATATT
GATATCGAAATTGATAAGAGCAAAACGATTGGCTCAGGCGATCCTGCTGGTATTAATGACGTAGTACTCGAAGCAGCACT
CTCTACCATTTTGGATTTGGAAGACTCTATTGCTGCAGTAGATGGCGATGACAAAGTGCTGGCCTATGAAAACTGGCTTG
GCATCCTAAAAGGTACTTTGGTTGAAGAGGTAAGTAAGGGTGGAAAAACTATTACCCGTGCCTTGAATCCTGATCGCAAG
TACAAGGCAGGTATTGGTGCCGTAAATGCAAAAGATGGAGTTGTGACTTTGCATGGCCGCTCACTCTTGTTCCTTCGTAA
CGTTGGCCACCTCATGACCAACCCAGCAATCATCACTGGCGAAGGCAAAGAGATTTACGAAGGTATTTTGGATGCAGTAG
TTACAGTATTGATTGCGTTGTACGACATTAATCGTCCAGCGACTCAGGCTATTGGAAACACACGTAAGGGTTCTGTTTAT
ATCGTTAAACCAAAAATGCATAGCCCTGAAGAGGTTGCTTTTGCAGGCGAATTGTTTGGACGTGTTGAGAAATTGTTAGG
CTTACCAGCCAATACAGTGAAGTTAGGCATCATGGATGAAGAGCGTCGTATGAGCGCCAACATCAAAGCAGCAATTGCAG
CGGCTGGTGCACGCGTAGCCTTTATTAATACCGGTTTCTTGGACCGTACTGGCGACGAAATGCACACCTCTATGTATGCG
GGCCCAATGATTCGCAAGGGCGATATGAAAGCCAGCAAATGGTTATCCGCTTATGAGCGTCGCAATGTGTTTGCAGGTCT
AGACTGTGGTTTACGTGGTCGCGCCCAAATTGGTAAGGGCATGTGGGCTATGCCAGACTTGATGAAAGCCATGGTTGAGC
AGAAGATCGTTCACCCGAAAGCAGGTGCAAATACTGCTTGGGTTCCATCACCAACAGCTGCTACTTTGCATGCGCTTCAT
TACCACCAAGTCAATGTAGCGGAACTCCAAAAAGAAATGGAAAAGGTTGATACGGCAGCGGAAGCTGAAGCATTGCTGAA
TGATCTCTTAACGATTCCGGTAGCAGAGCAAGCAAATTGGTCTAAAGAAGAAATTCAACAAGAATTAGATAACAACTGCC
AAGGTATCTTGGGTTATGTAGTTCGTTGGATTGATCAAGGCGTTGGTTGCTCCAAGGTTCCTGATATTCATAACGTTGGC
CTCATGGAAGACCGCGCTACATTGCGTATTTCCAGTCAGCATATTGCAAACTGGCTATTGCACGGCGTTGTTACTGCCGA
TCAAGTCAACGAGACATTGCAACGTATGGCTAAAGTGGTTGATGGGCAAAATGCTGGTGACTCTTTGTACAAGCCTATGA
TGCCCCATTACAAAGATTCTTACGCTTATAAAGCTGCAAGCGACTTGATTTTCAAGGGTCTCGAGCAGCCCAATGGCTAC
ACAGAGCCTTTGTTGCACGCTTGGCGCTTAGAAGTAAAGAAGGCGAACGCATAG

Protein sequence :
MTARTTCNSLQVATPLYRFIEDKVLPGTGIKSADFWKGFDEIVKDLTPKNEALLAKRDRIQVDLDKWHQANPGPIKDMPA
YRKFLKEIGYLDDVPGKVLGTTENVDDELALQAGPQLVVPVLNARYALNAANARWGSLYDALYGTDVLSEEDGATKAGAY
NPIRGAKVVAFARNFLDQSAPLAKGSHRDAVSYTVDGNKLSIKLKDGSTTGLADEKQFVGYQGDAAAPSSILLRNNGVHI
DIEIDKSKTIGSGDPAGINDVVLEAALSTILDLEDSIAAVDGDDKVLAYENWLGILKGTLVEEVSKGGKTITRALNPDRK
YKAGIGAVNAKDGVVTLHGRSLLFLRNVGHLMTNPAIITGEGKEIYEGILDAVVTVLIALYDINRPATQAIGNTRKGSVY
IVKPKMHSPEEVAFAGELFGRVEKLLGLPANTVKLGIMDEERRMSANIKAAIAAAGARVAFINTGFLDRTGDEMHTSMYA
GPMIRKGDMKASKWLSAYERRNVFAGLDCGLRGRAQIGKGMWAMPDLMKAMVEQKIVHPKAGANTAWVPSPTAATLHALH
YHQVNVAELQKEMEKVDTAAEAEALLNDLLTIPVAEQANWSKEEIQQELDNNCQGILGYVVRWIDQGVGCSKVPDIHNVG
LMEDRATLRISSQHIANWLLHGVVTADQVNETLQRMAKVVDGQNAGDSLYKPMMPHYKDSYAYKAASDLIFKGLEQPNGY
TEPLLHAWRLEVKKANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 62