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Name : Pnuc_1513 (Pnuc_1513) Accession : YP_001156291.1 Strain : Polynucleobacter necessarius QLW-P1DMWA-1 Genome accession: NC_009379 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1587824 - 1589743 bp Length : 1920 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: dar:Daro_3996 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATTCCTGAGTTTGGACATTACGCACTCATTCTGGCTCTATGCATCTCCTTAATTCAGGGGGTATTACCTTTGCTCGG AGCGCATTATGGTCGCCGTGAATGGTTGGTATTGGCTAGACCTGCTGCCCAAGCCTTATTTTTATTATTAGCGATTGCCT TTGGAATCTTGGCATGGAGTTTTTACGTTAATGATTTTTCTGTGCTTTATGTAGCCGAGCACTCTAACTCCCAATTGCCG GTAATTTATCGCTTAGGGGCGGTCTGGGGCGGACATGAAGGCTCGCTACTTCTGTGGATCTTTTTATTAAGTACCTGGAC TATCTTAGTGGCGCAACTCTCTAAAGCTTTAGACGAGTTCATGGTGGCACGAGTGATTGGTGTCTTAGGTTTGGTTGCTA GTGGTTTATTGCTATTTGTTTTAACTACTTCCAATCCTTTTGAGCGTTTACTGCCTGCAGCGCAAGATGGCCGTTCACTA AATCCTTTATTGCAAGATCCCGGATTAGTGTTTCATCCGCCAATGCTCTATATGGGATACGTCGGTTTTTCAGTGGCCTT TGCTTTTGCTATTGCGTCATTGTTATCTGGCCGATTGGATGCCGCTTGGGCTCGCTGGTCTAGACCTTGGACCACTGCAG CGTGGGTATTTTTAACTCTCGGTATAGCACTGGGTTCTTGGTGGGCTTATTACGAATTGGGTTGGGGTGGTTGGTGGTTT TGGGATCCTGTAGAAAACGCTTCATTTATACCTTGGCTGGTCGGCACCGCTTTATTGCATTCATTGGCGGTTACTGAAAA GCGTGGTGGCTTCAAAAGCTGGACAGTGTTACTGGCGATCACTGCGTTCTCACTCTCTTTATTGGGAACATTTTTAGTGC GCTCTGGGGTACTCACTTCAGTGCATGCCTTTGCAACTGATCCACGACGCGGTATTTTTATTCTGATTTTTCTTTCCTTG GTGGTGGGTTCTTCATTAACCCTCTATGCATGGCGAGCACCTAAAAGTTCCTTGGGCGGCAAATTTAATTTGAGCTCAAG AGAGACTTTTATCTTGCTAGGAAATGTATTTTTAGTAGTGTCCGCAGGCTCAGTACTGCTAGGAACGCTCTATCCATTAT TAATTGATGCATTACACCTTGGGAAGATTTCAGTAGGCCCCCCGTATTTCAATAGCGTATTTGTGCCGATCATGGTTCCC TTGTTGGTTCTCATGGGAATAGGCCCTTGGACTAATTGGAAAAATACTAATCTAATCCTTGTGATTAAGCGCCTTTGGTT AGCAGGATTAGTTGCAGTAATTGCTGGAGTGCTGATACCACTAATCATGGGCCAATTTACTTGGCTTGCCGGGCTTGGTT TTCTACTAGCATTTTGGGTCATTGCTTCCGGATGTATGCAGATTGTTCGTCAGGCCAAAGCAGGCAAGCCAACGCGTTCA TTTATCGGTATGCAAATAGCTCATCTCGGGATTGCCATCTTTGTGATTGGCGTCACGATGGTAGGTGCTTATCAAGAGGA AAAAGATGTTCGCATGTTGGCTGGTGAATCGGTGACTGTTGGTGGATATCAAATTCAGCTCCAAGGCGTTAATCCTGTAG CCGGACCGAATTACAAAGCGATACGAGGTAGCTTTTTATTGAGCAAGGATGGCGTTGCCCAAGCAACCCTAAACCCTGAG AAGCGTAGCTATTTTTCTTCTACGATGCCCATGACTGAAGCGGCAATCAATGCAGGCTTAACCAGAGATATTTATGTTTC TTTGGGTGAAGAACTCGACGATAAATCTTGGGCTGTTAGGGTTTATTACAAGCCGTTTGTTGATTGGATTTGGGGCGGAT GTTTATTGATGGCCTTGGGTGGTGTTTTGGCGATATCCGATAAGCGCTATCGCATCAAATTAAAAAGAGTGGGTTCATGA Protein sequence : MIPEFGHYALILALCISLIQGVLPLLGAHYGRREWLVLARPAAQALFLLLAIAFGILAWSFYVNDFSVLYVAEHSNSQLP VIYRLGAVWGGHEGSLLLWIFLLSTWTILVAQLSKALDEFMVARVIGVLGLVASGLLLFVLTTSNPFERLLPAAQDGRSL NPLLQDPGLVFHPPMLYMGYVGFSVAFAFAIASLLSGRLDAAWARWSRPWTTAAWVFLTLGIALGSWWAYYELGWGGWWF WDPVENASFIPWLVGTALLHSLAVTEKRGGFKSWTVLLAITAFSLSLLGTFLVRSGVLTSVHAFATDPRRGIFILIFLSL VVGSSLTLYAWRAPKSSLGGKFNLSSRETFILLGNVFLVVSAGSVLLGTLYPLLIDALHLGKISVGPPYFNSVFVPIMVP LLVLMGIGPWTNWKNTNLILVIKRLWLAGLVAVIAGVLIPLIMGQFTWLAGLGFLLAFWVIASGCMQIVRQAKAGKPTRS FIGMQIAHLGIAIFVIGVTMVGAYQEEKDVRMLAGESVTVGGYQIQLQGVNPVAGPNYKAIRGSFLLSKDGVAQATLNPE KRSYFSSTMPMTEAAINAGLTRDIYVSLGEELDDKSWAVRVYYKPFVDWIWGGCLLMALGGVLAISDKRYRIKLKRVGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-171 | 63 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-132 | 55 |
