Gene Information

Name : Pnuc_1516 (Pnuc_1516)
Accession : YP_001156294.1
Strain : Polynucleobacter necessarius QLW-P1DMWA-1
Genome accession: NC_009379
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1590359 - 1591129 bp
Length : 771 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: net:Neut_0061 heme exporter protein CcmC

DNA sequence : 
ATGAGTAATGTGAATAATTTTTCGAATAGCCGTTTGATTAACTGGTTTAAGTTATCCAGTCCTAGCACCTTTTATCCAGT
TGCTGGAAAGCTGATCCCCATTTTTTGGATCTTAACTGCGCTCTTCGGTATTGCTGGTCTTTGGGTCAGTTTTTTTGTTG
CACCAGTAGATGCGGTGCAAGGACAGGGTTACCGCATTATCTTTATTCATGTCCCCGCATCTTGGATGTCCATGTTTATT
TATTTGGTGATGGCAATGTGGGCTGGACTAGGCCTTGTATTTAATACGCGTCTATCAGCGATGATGGCGCAAGCATTAGC
ACCGATTGGTGCTTGGATGACATTCATATCCTTATGGACCGGGGCCTTTTGGGGTAAACCAATGTGGGGTGCTTGGTGGG
TGTGGGACGCGCGCCTCACATCTGAATTAATTTTGCTGTTTCTATATTTGGGCTTTATTGCCCTGCAAGCTTCTATTGAT
AACCCAAGAAGAGCTGATAAGGCGGGTGCTATTCTTGCTTTAGTTGGCGTGGTCAATATCCCCGTTATTTATTTTTCAGT
GAAGTGGTGGAATACCTTGCACCAAGGCGCCTCTGTTTCTTTGACAAAATCCCCTGCGATGGCTCAAACCATGCTCTTAG
GAATGTTATTGATGGCGCTGTGTTTCTGGATGTATTCGATTGCAGTTGGATTAATGCGAGTACGTACCATTATTTTGGAG
CGTGAATCCCATACCGATTGGGTGAGACAATTGGATGAGGTAAAAAATTAA

Protein sequence : 
MSNVNNFSNSRLINWFKLSSPSTFYPVAGKLIPIFWILTALFGIAGLWVSFFVAPVDAVQGQGYRIIFIHVPASWMSMFI
YLVMAMWAGLGLVFNTRLSAMMAQALAPIGAWMTFISLWTGAFWGKPMWGAWWVWDARLTSELILLFLYLGFIALQASID
NPRRADKAGAILALVGVVNIPVIYFSVKWWNTLHQGASVSLTKSPAMAQTMLLGMLLMALCFWMYSIAVGLMRVRTIILE
RESHTDWVRQLDEVKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 7e-77 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnuc_1516 YP_001156294.1 heme exporter protein CcmC VFG1856 Protein 4e-37 46