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Name : Pnuc_1781 (Pnuc_1781) Accession : YP_001156558.1 Strain : Polynucleobacter necessarius QLW-P1DMWA-1 Genome accession: NC_009379 Putative virulence/resistance : Unknown Product : D-lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.2.4 Position : 1857309 - 1858814 bp Length : 1506 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: reh:H16_A3094 glycolate oxidase subunit GlcD DNA sequence : ATGATTGTTATGAATATGGTGACCCCGCCCCCCGATATAGCCGCTATTAGCGCACTTCAGTCCAAATTAGTCTCCGCTTT GCGACCGATACTTCCTGAGCACGCCCTACTTTGGGAGCCAGAAGACACAATCCCTTATGAATGTGATGGTTTGGCGGCCT ATAGACGCATGCCTTTGGCAGTTGCCCTCCCTGAAACTGAAGCTCAAGTCACTCAAATCCTGAAGATTTGCTTTGACATG AATATTCCAGTGGTGCCTCGAGGTTCTGGCACCGGACTATCGGGTGGTGCGATGCCCATATCCCAAGGCCTAGTTTTGTC ACTAGCCAAGCTCAAGAAAATTCTCAGTATTGATCCATTTACAAGAACAGCTGTTGTACAACCAGGCGTTCGCAATCTTG CCATTTCGGAAGCAGTAGGTCATTTGGGTTTGTACTACGCACCAGATCCGTCATCACAAATTGCCTGCTCTATTGGTGGC AATGTGAATGAAAACTCAGGCGGTGTTCATTGCCTGAAATATGGACTTACCTTGCACAATGTCTTGCGTGTTCGTGGAGT ACTCATGAATGGCGAGATTGTTGAGTTTGGCAGTCTTGCACCTGACTCTCCTGGATTAGATTTGCTAGCCATCATGATGG GTAGTGAAGGTATGTTGGCTGTGGTGACTGAAGTTACAGTCAAGCTCGTTGCCAAACCAAAACTCGCACGCGTCATTATG GCCAGCTTTGATGACATTGAAAAAGGTGGCAATGCTGTCGCCGCCATTATTGCCGCAGGCATTATTCCTGCCGGTTTAGA GATGATGGATAAGGCCACTACTCGTGCCGTGGAAGAGTTTGTGCATGCAGGTTATGACTTAGATGCTGCTGCAATTTTGC TTTGTGAATCCGATGGCACTCCAGAAGAAGTGGCAGAAGAAATTGAGCGCATGACTAAGGTATTAGAGGAAGCTGGCGCC AGCGGTATCCAGATTTCTCAGAATGAATCTGAGCGACTCAAATTTTGGAGTGGGCGTAAAAATGCATTTCCAGCAGCAGG TCGTTTAGCGCCAGATTACTACTGCATGGATGGCACAATTCCACGTCGCCATATCGCGACCCTGCTAAAGCGTATCCAAG GTATGGAAACAAAATATGGCCTAGGCTGCTTAAATGTATTTCATGCCGGCGATGGCAATATGCATCCACTCATTTTATTT AATGGTTCAGACCAGGAAGAGTGGCATCGTGCAGAGGAATTTGGCACTGAAATCTTAGAAGCTTGTGTTGAGTTAGGCGG AACCATCACTGGAGAGCATGGTGTAGGCATCGAAAAAATTAACTCCATGTGTGTGCAATTTGGTGAGGGTGAACGTGAAT CCTTTTGGGGAGTGAAAAGCGCTTTTGATCCAGGGCATCTATTGAATCCTGATAAGGCGATCCCAACCTTAAGTCGTTGC GCCGAATATGGCCGCATGCGCATCAGCGGCGGCAAATTACCTCATCCAGAATTGGAGCGCTTCTAA Protein sequence : MIVMNMVTPPPDIAAISALQSKLVSALRPILPEHALLWEPEDTIPYECDGLAAYRRMPLAVALPETEAQVTQILKICFDM NIPVVPRGSGTGLSGGAMPISQGLVLSLAKLKKILSIDPFTRTAVVQPGVRNLAISEAVGHLGLYYAPDPSSQIACSIGG NVNENSGGVHCLKYGLTLHNVLRVRGVLMNGEIVEFGSLAPDSPGLDLLAIMMGSEGMLAVVTEVTVKLVAKPKLARVIM ASFDDIEKGGNAVAAIIAAGIIPAGLEMMDKATTRAVEEFVHAGYDLDAAAILLCESDGTPEEVAEEIERMTKVLEEAGA SGIQISQNESERLKFWSGRKNAFPAAGRLAPDYYCMDGTIPRRHIATLLKRIQGMETKYGLGCLNVFHAGDGNMHPLILF NGSDQEEWHRAEEFGTEILEACVELGGTITGEHGVGIEKINSMCVQFGEGERESFWGVKSAFDPGHLLNPDKAIPTLSRC AEYGRMRISGGKLPHPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-134 | 60 |
