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Name : Pnuc_1791 (Pnuc_1791) Accession : YP_001156568.1 Strain : Polynucleobacter necessarius QLW-P1DMWA-1 Genome accession: NC_009379 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1868520 - 1870379 bp Length : 1860 bp Strand : + Note : TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rso:RSc2715 probable-export membrane protein secd transmembrane DNA sequence : ATGAATCGCTATCCTCTCTGGAAATATTTAGTCATCGCCGTAGCTTTATTAATTGGCGGACTTTATTCATTACCCAATTT CTATGGTGAGGCGCCTGCGGTTCAAGTATCGTCCGCCAAACCAACCATTAAGGTTGATTTGGCGACTCAGTCTCGTGTAG AAAAAATTCTGGCTGATGCAAATATAAGTACTACAGGGATGTTTTTTGAAAGTGCTGGTAGCGTTGGAACGATCAAGGCT CGTTTTAACAATACCGATATTCAACTACGCGCCCGCGACCTCTTGCAGCAAAAGCTAAATACAGATCAAAACGATCCGAA CTACACCATTGCTTTAAACCTACTATCGAACACACCAAGCTGGTTGAATGCGATCAATGCACTTCCTATGCCTTTGGGTC TTGACTTGCGTGGCGGAGTTTATTTCCTGCTACAAGTCGACATGAAGGGTGCAGTACAAAAGAAAGTGACCGCCCTCTCA ACTGATATTCGCAGTCAATTAAGAAGTAACAATATTCGCCATCAAGGCATTGATCGTAGCCCTGACTCTATTACGATAAA TTTTGGCAGTACAGACGAGGCTGAAGCAGCTCGTACCCTTTTAAATACATCCCAACCAGATCTCATTTGGATCATCAGAA ATGGTGCAGGTTCGGTCAAATTGCTCGGTGAATTTAAACCCAAAGCCTTAGCAGATATTCAAAATAATGCTGTCAAACAA AATATCATCACCCTCAATAAGCGGGTGAATGAATTAGCCGTAAAAGAGCCCGTTATTCAACAACAAGGTGCCGAGCGTAT CGTAGTTCAGCTACCAGGGGTGCAAGATACCGCGCGTGCCAAGGATATTATTGGTCGCACTGCAACTCTGGAATCACGTC TTGCAGATCCACTCGTCTCTAGAATCAATGTAGGCGAAGCTGCGCCTCCCGGAACGGATACCTTCCGTTTTGGTGAAAAC CAAATGGGTGTTTTCAAAAAATCCGTCATATTTAGCGGTGATAACATTACTGACGCTAGTGCTGGCTTCGATCAGAACCA ACGCCCTGCAGTGAATATCTCCCTGGATGCTACCGGCGGTCGCGTGATGCAAGAAGTCACTCGCGAAAACATTGGCAAGC CAATGGGCATGATCTTATTTGAGAAAGGCAAAGGTGAAGTACTCACTATTGCCACTATCCAAAGTGAATTCGGTGCTAAG TTTCAAATTACGGGTCAACCCACTACAGAGAGCGCTAATGACCTCGCCTTGTTACTGCGCGCAGGCTCATTGGCAGCCCC AATGGAAATTATTGAGGAGCGCACCATTGGACCAAGCTTGGGTGCTGAAAATATTGAAAAAGGTTTTAAATCTCTCTTAA TTGGATTTACAGCAATTTCTATTTTCATGGTGGCGTACTATTTATTGTTTGGCACCTTCTCAGTTATTGCATTGGCAGTC AACTTGTTGCTGCTGATTTCCATCCTCTCCATGCTGCAAGCAACGCTTACCTTGCCAGGTATTGCTGCGATGGCATTGGC CTTAGGTATGGCGATTGACTCCAACGTATTAATTAACGAACGTATTCGTGAAGAACTCCGTAATGGCTCTTCACCTCAAA TGGCGATCTCCATTGGTTTTGATAAAGCTTGGGCCACTATTCTTGACTCAAACGTCACTACATTGATTGCTGGTCTTGCA TTGCTGGCTTTTGGTTCAGGCCCTATTAAAGGCTTTGCGATAGTGCATTGCTTAGGTATTTTGACTTCAATGTTCTCAGC TGTCTTCTTCTCGCGTGGTCTCGTCAACCTTTGGTATGGCAGACATAAGAAGATTTCCAAACTCGCGATCGGCCAAGTTT GGCGCCCACAGGAGAAATAA Protein sequence : MNRYPLWKYLVIAVALLIGGLYSLPNFYGEAPAVQVSSAKPTIKVDLATQSRVEKILADANISTTGMFFESAGSVGTIKA RFNNTDIQLRARDLLQQKLNTDQNDPNYTIALNLLSNTPSWLNAINALPMPLGLDLRGGVYFLLQVDMKGAVQKKVTALS TDIRSQLRSNNIRHQGIDRSPDSITINFGSTDEAEAARTLLNTSQPDLIWIIRNGAGSVKLLGEFKPKALADIQNNAVKQ NIITLNKRVNELAVKEPVIQQQGAERIVVQLPGVQDTARAKDIIGRTATLESRLADPLVSRINVGEAAPPGTDTFRFGEN QMGVFKKSVIFSGDNITDASAGFDQNQRPAVNISLDATGGRVMQEVTRENIGKPMGMILFEKGKGEVLTIATIQSEFGAK FQITGQPTTESANDLALLLRAGSLAAPMEIIEERTIGPSLGAENIEKGFKSLLIGFTAISIFMVAYYLLFGTFSVIALAV NLLLLISILSMLQATLTLPGIAAMALALGMAIDSNVLINERIREELRNGSSPQMAISIGFDKAWATILDSNVTTLIAGLA LLAFGSGPIKGFAIVHCLGILTSMFSAVFFSRGLVNLWYGRHKKISKLAIGQVWRPQEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-96 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-96 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-96 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-96 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-95 | 43 |
