|
Name : lolD (YPDSF_1822) Accession : YP_001163180.1 Strain : Yersinia pestis Pestoides F Genome accession: NC_009381 Putative virulence/resistance : Resistance Product : lipoprotein transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 2057772 - 2058476 bp Length : 705 bp Strand : - Note : outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone DNA sequence : ATGAGTAATCATCCTTTATTACAATGTATAAACCTGTGCAAGCGTTATCAGGAAGGCCAACTGCATACTGATGTCCTGCG CAATGTCTCTTTCGCTATCGAGCCTGGTGAACTGATGGCGATTGTCGGCAGTTCAGGTTCAGGTAAAAGCACGCTGTTGC ATTTGCTGGGGGGGCTGGATTCACCTACCTCTGGTGAGGTTATTTATCAGGGGCGTTCGCTTAACCAACTCTCTTCTACC GCGAAAGCTGAATTGCGTAATCGGGAGTTAGGTTTTATCTATCAATTTCATCATTTGTTGCCCGATTTTACCGCGTTAGA AAATGTCGCCATGCCATTACTCATCGGCGGCAGTAAACCCGCTGAAGCGCAAGAGAAAGCCCATGAGATGCTGGCGGCGG TGGGGTTGGAGAAGCGCAGTAAACATCGTCCATCGGAGTTATCAGGGGGAGAGCGCCAACGGGTCGCTATCGCCCGTTCT TTGGTAAATAACCCATCGCTGGTATTGGCAGATGAACCTACCGGTAATCTGGACCAACGCAATGCCGACAGTATTTTTAA TCTGTTAGGTGAATTGAATGTTCGTCAGGGGACCGCGTTTCTGGTGGTGACTCACGATTTACAATTAGCGAAACGGATGA GCCGTCAACTTGAAATGCGAGATGGTCAGCTACAACACCATTTGACGCTGGTGGGGGCCGAGTGA Protein sequence : MSNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYQGRSLNQLSST AKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARS LVNNPSLVLADEPTGNLDQRNADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lolD | YP_001163180.1 | lipoprotein transporter ATP-binding protein | NC_008702.1.4606598. | Protein | 2e-39 | 48 |
| lolD | YP_001163180.1 | lipoprotein transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 2e-40 | 46 |
