Gene Information

Name : PST_2642 (PST_2642)
Accession : YP_001173134.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2860829 - 2861542 bp
Length : 714 bp
Strand : -
Note : Code: V; COG: COG1136

DNA sequence : 
ATGAGTGAGCGGGTTATGAACGAGCTGTCTTCGCAAAAGCAGGCGGTGCTGAGTTGCCGCAACCTGGGCAAGCGCTACGA
GCAGGGCCCCGAATCGGTGGAGGTCCTGTCCGGGCTGCAACTTGAACTGTTCCCCGGGCAGCGCGTGGCCATCGTCGGCA
GCTCCGGCTCGGGCAAAAGCACGCTGCTGAACCTGCTCGGTGGGCTCGATACGCCGAGCGAGGGCAGCGTCTGGCTGGCC
GGCGAGGAGTTGTCGGCGCTGAACGAGAAGGATCGTGGGCTGCTGCGCAACCGCGCATTGGGCTTCGTCTATCAGTTCCA
TCACCTGCTTGCCGAGTTCACCGCGCTGGAGAACGTTTGCATGCCGCTGCTGATCGGGCGCACGCCGATCCCGGAAGCGC
GGCAGCGAGCGTCGGCTCTGCTGCAGCGGGTCGGCCTCGGCCATCGCCTGGAGCACAAGCCTGCGGAGCTGTCCGGTGGC
GAGCGACAGCGCGTGGCCATCGCTCGGGCATTGGTCAACGAGCCGGCACTGGTATTGCTCGATGAGCCAACCGGCAACCT
GGACCATCACACCGCGCAAGGCATTCAGGATCTGATGCTCGAACTCAGCACCTCGCTGCATACCGCTTTTCTCGTGGTTA
CCCACGACCACCAGCTTGCCGCCCAGATGGACCAGGTGCTGCGGCTGGAAGACGGGCGCCTGGTGGCCGAATGA

Protein sequence : 
MSERVMNELSSQKQAVLSCRNLGKRYEQGPESVEVLSGLQLELFPGQRVAIVGSSGSGKSTLLNLLGGLDTPSEGSVWLA
GEELSALNEKDRGLLRNRALGFVYQFHHLLAEFTALENVCMPLLIGRTPIPEARQRASALLQRVGLGHRLEHKPAELSGG
ERQRVAIARALVNEPALVLLDEPTGNLDHHTAQGIQDLMLELSTSLHTAFLVVTHDHQLAAQMDQVLRLEDGRLVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_2642 YP_001173134.1 lipoprotein releasing system, ATP-binding protein LolD NC_012469.1.7686878. Protein 9e-37 45
PST_2642 YP_001173134.1 lipoprotein releasing system, ATP-binding protein LolD NC_008702.1.4606598. Protein 1e-32 43