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Name : secD (PST_3049) Accession : YP_001173532.1 Strain : Pseudomonas stutzeri A1501 Genome accession: NC_009434 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3278380 - 3280107 bp Length : 1728 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGGCCGATCTCGAGCGCATAAGCCAGGCGCTCGAGGAAGGCGGCATTGCGGTGAAGTCCGCTTCGCTCGACGAACAGGG CCGTGGTGGTCTCGTGCGTCTGGAGCGTCAGGATGATCAGCTGCCGGCCAAAGATATCGTTCGGCGCACGCTGGGTGATG CCTATGTCGTTGCGCTCAACCTTGCACCGACCACTCCAGACTGGCTGCGCAGTCTCGGGGCTAGCCCCATGAAGCTCGGT CTCGACCTCTCCGGCGGCGTGCACTTCCTGCTGGAAGTCGATATGGAGAAGGCCATCGAGACGCGGCTGAACGTCTCCGA AGGCGAGGTCAAAAGCCTGCTGCGCAAAGAGCGCGTGCGCTATCGCAGCCTGCCGAATCTGAAGGATGCCGTGCAGCTGG GCTTCGCCGATCAGGAAACCCTCAGCGCCGCTCAGTCGCTGATTCGCAAGAACTTCACCGATTTCGAGCTGACCACCAGC GAGCGCAACGGCCAATTCGTGCTGCGTCTGACGCTGACCGAGGCCAAGTTGGCTGAGATCCGCGAATATTCGATCAAGCA GAACCTGACCACCGTGCGCAACCGCGTCAACGAGCTGGGCGTCGCCGAGCCGCTGGTGCAGCGCCAGGGGGCCAACCGCA TCGTGGTCGAACTGCCGGGCGTACAGGACACTGCCGAAGCCAAGCGCATTCTCGGCAAGACGGCCAATCTGGAGTTCCGC CTTGCGGCCGAGTCCGATGCGCCGCGCGCCTCGACCGAAACCTTCGAGTTCCGCGAGGAAGGTCGTCCGCCCGTGCAGCT CGAGCGTACCCTGATCATCACCGGTGATCAGGTGACCGATGCGCAAGCCAGTTACGACGAAAATGGCCGCCCGCAGGTGA ACATCCGCCTCGACGGACATGGCGGCGATCTGATGAACCGTGCTACCCGCAGTAACGTCGGGCGCAGCATGGCGGTGATC TTCATCGAGCAGCGGCCGCTGACTCGCTACGTGCGGCAGATGGTCGATGGCGTCGAGCAGGAAGTGCGGGTCGAAACCTT CCAGGAAGAAAAGAAGATCATCAGTCTGGCGACCATCCAGTCGCCGCTCGGCAGTCAGTTCCGCATTACCGGCCTCAATG GTCAGGGCGAATCGTCGGAACTTGCCCTGCTGCTGCGCGCTGGTGGTCTGGCGGCGCCGATGTACTTCGCCGAGGAGCGC ACCATCGGTCCGAGCCTGGGCGCGGAGAACATCAAGCTGGGCGTGCAGGCCGCGATGTGGGGCTTCCTCTTCGTCGCCAT CTTCATGGTGCTGATCTACAAGTTCTTCGGCGTGCTTGCCACTATTGCGCTGCTGTTCAACATGGTCGCGCTGACGGCAT TGATGTCGATGCTCAACGCCACGCTGACCCTGCCAGGTATCGCCGGTATCGTGCTGACCATGGGTATGGCGGTGGACGCC AACGTGCTCATCTTCTCGCGTATTCGCGAGGAGATTGCCAATGGCATGTCGATCCAGCGGGCCATCCACGAGGGCTTCGA CAGGGCCTTCTCGGCGATCCTCGACGGCAACCTCACCACCTTGCTGGTGGGCGGCATCCTGTTCGCCATGGGTACCGGCC CGATCAAGGGCTTCGCGGTGACCCTGTCGATCGGCATCCTGACGTCGATGTTCACCGCAATCATCGTGACGCGCGGCATG GTCAACCTGATCTACGGTGGCCGCGATCTCAAGAAGCTGTGGATTTAA Protein sequence : MADLERISQALEEGGIAVKSASLDEQGRGGLVRLERQDDQLPAKDIVRRTLGDAYVVALNLAPTTPDWLRSLGASPMKLG LDLSGGVHFLLEVDMEKAIETRLNVSEGEVKSLLRKERVRYRSLPNLKDAVQLGFADQETLSAAQSLIRKNFTDFELTTS ERNGQFVLRLTLTEAKLAEIREYSIKQNLTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFR LAAESDAPRASTETFEFREEGRPPVQLERTLIITGDQVTDAQASYDENGRPQVNIRLDGHGGDLMNRATRSNVGRSMAVI FIEQRPLTRYVRQMVDGVEQEVRVETFQEEKKIISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEER TIGPSLGAENIKLGVQAAMWGFLFVAIFMVLIYKFFGVLATIALLFNMVALTALMSMLNATLTLPGIAGIVLTMGMAVDA NVLIFSRIREEIANGMSIQRAIHEGFDRAFSAILDGNLTTLLVGGILFAMGTGPIKGFAVTLSIGILTSMFTAIIVTRGM VNLIYGGRDLKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 79 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 79 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 79 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 79 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 79 |
