Gene Information

Name : PST_4176 (PST_4176)
Accession : YP_001174640.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4531200 - 4531715 bp
Length : 516 bp
Strand : -
Note : Code: K; COG: COG1595

DNA sequence :

ATGGCAACAGAAGGTATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCT
GCGCCGTCAGCTCGGCTGTAGTCAGCGTGCGGCCGACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAGGACGACG
ACATGGCTGCGATCCGCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGCCTGTTGATCAACCATTGGCGCCGCCGG
CAGATCGAGCAGGCCTATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCACCGGAGTCCCAGGCGCTGAT
TGTCGAAACCCTGCTGCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGC
TGCACGGCATGACCTACGCGGCTATCGCCACCGAACTGGGTGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCC
ATGCTGCATTGCCTGATGCTGGTAGCGGAGGACTGA

Protein sequence :

MATEGMLRQQMLHRFYADHHGWLNGWLRRQLGCSQRAADLAQDTFVRVLSKDDDMAAIREPRAYLHTIAKGLLINHWRRR
QIEQAYLDALALQPEPVAPSPESQALIVETLLRIDAMLAQLPTRVRSAFLMSQLHGMTYAAIATELGVSERMVKKYMAQA
MLHCLMLVAED

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-34	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PST_4176	YP_001174640.1	ECF subfamily RNA polymerase sigma-70 factor	VFG1049	Protein	4e-35	49