Gene Information

Name : Csac_1352 (Csac_1352)
Accession : YP_001180145.1
Strain : Caldicellulosiruptor saccharolyticus DSM 8903
Genome accession: NC_009437
Putative virulence/resistance : Unknown
Product : transketolase, central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1521132 - 1522073 bp
Length : 942 bp
Strand : +
Note : PFAM: Transketolase, central region; Transketolase domain protein

DNA sequence : 
ATGGCAAAAATAGCAACAAGGGAAGCATATGGTCAAGCACTGGCTGAGTTTGGTGAAGTGTACAAAGACATTGTTGTACT
TGATGCAGACCTTTCAAAATCCACAAGGACAGAGATTTTCAAAAAGAAGTTTCCTGATAGATTTTTCAATATAGGAATAG
CAGAGCAAGACCTTATGGCAACAGCAGCGGGACTTGCAACATGTGGCAAGATTCCTTTTGCAAGCACATTTGCTGTCTTT
GCAGCAGGAAGAGCGTATGACCAGGTGAGAAACTCCATTGGCTATCCACATCTTAATGTCAAGATTGGAGCATCACATGC
TGGTGTGTCAATTGGCGAGGACGGTGCATCTCACCAAATGCTTGAAGATATAGCATTGATGAGAGTAATTCCTGGTATGG
TAGTGCTCTCTCCTTCTGATGCAGTATCCACGTATGAATGTGTAAGGCTTGCAATCGAACATGAAGGCCCTGTTTATATT
AGACTTGGCAGGCTTGGTGTTGAAGAGATTTACAAAAAAGGAGAGTTGAATCTTTCTCTTGGTAAAGGTATTGTTCTGCA
AAAAGGCACTGACGTTGGAATTTTGGCAACAGGGCTGATGGTCCATGAAGCTATAAAAGCTGCAAAGATGCTCCAGGATG
AGGGAATTTCGGTATATCTTGTTGATATGCCATGCATAAAGCCAATTGATATTGATTTGATTTTAGATGTTGCAAAAATG
ACTGGCTGCATTGTCACAGCAGAAGAGCACAATATCCTTGGCGGTTTTGGAAGTGCTGTTTCTGAGGTTTTGATTCAAAA
CTATCCTGTACCGGTAAAAATGGTTGGAGTAAATGATGAGTTTGGAAGGTCAGGAAAGCCTGAGGATGTTTTGAAATACT
ACAAGCTTACAGCAGAGGAGATTGTAAATAAAGCAAAAGAGGTTATGAAGATGAAAAGATAA

Protein sequence : 
MAKIATREAYGQALAEFGEVYKDIVVLDADLSKSTRTEIFKKKFPDRFFNIGIAEQDLMATAAGLATCGKIPFASTFAVF
AAGRAYDQVRNSIGYPHLNVKIGASHAGVSIGEDGASHQMLEDIALMRVIPGMVVLSPSDAVSTYECVRLAIEHEGPVYI
RLGRLGVEEIYKKGELNLSLGKGIVLQKGTDVGILATGLMVHEAIKAAKMLQDEGISVYLVDMPCIKPIDIDLILDVAKM
TGCIVTAEEHNILGGFGSAVSEVLIQNYPVPVKMVGVNDEFGRSGKPEDVLKYYKLTAEEIVNKAKEVMKMKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 2e-40 43
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 9e-34 41