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Name : rnhA (Sputcn32_1779) Accession : YP_001183303.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2025488 - 2025958 bp Length : 471 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGACTGAACGAAAACTGATCCACATCTTCACTGACGGCTCTTGCTTAGGCAACCCCGGCCCCGGTGGCTATGGCATTGT AATGAATTATAAGGGTCATACAAAGGAGATGTCCGACGGTTTTGCACTTACCACCAATAATCGCATGGAATTGTTGGCAC CAATCATCGCCCTAGAAAGTCTTAAAGAACCTTGCAGAGTCGTTCTTACCAGTGATAGTCAATATATGCGCCAAGGCATA ATGACGTGGATCCACGGTTGGAAGAAAAAAGGGTGGATGACCTCAAACCGTACGCCTGTCAAAAATGTGGATCTTTGGAA ACGCTTAGATAAAGTATCGCAAATGCACACTATCGATTGGCAATGGGTAAAAGGCCACGCTGGCCATGCTGAAAACGAGC GTTGTGATATCCTAGCACGCTCCGCGGCTGAAGCGAATCCAACCCAAATCGATGAAGGTTATCAACCTTAA Protein sequence : MTERKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFALTTNNRMELLAPIIALESLKEPCRVVLTSDSQYMRQGI MTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKVSQMHTIDWQWVKGHAGHAENERCDILARSAAEANPTQIDEGYQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 9e-49 | 64 |
