Gene Information

Name : Sputcn32_0210 (Sputcn32_0210)
Accession : YP_001181745.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 231372 - 231674 bp
Length : 303 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: ssn:SSO_2058 putative propanediol utilization protein: polyhedral bodies

DNA sequence : 
ATGCAACAAGAAGCGTTAGGTATGGTCGAGACCAAAGGTCTGACTGCAGCAATAGAAGCTGCTGATGCGATGGTCAAATC
AGCCAATGTCGTGCTCATTGGTTACGAAAAAATTGGTTCTGGTCTGATAACAGTGCTCGTACGCGGAGATGTGGGTGCAG
TCAAAGCCGCCACCGATGCCGGTTGTGCCTCTGCTCGTCAGATCGGCGATGTCATCGCTACCCATGTCATTCCACGTCCG
CATTCTGATGTTGAAAAACTCCTGCCAGCAGGCCTTAAACCATCTGAAGGAGTTAAACAATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVVLIGYEKIGSGLITVLVRGDVGAVKAATDAGCASARQIGDVIATHVIPRP
HSDVEKLLPAGLKPSEGVKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-21 65
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 7e-23 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-22 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_0210 YP_001181745.1 microcompartments protein VFG1598 Protein 5e-22 65
Sputcn32_0210 YP_001181745.1 microcompartments protein VFG1596 Protein 3e-23 65
Sputcn32_0210 YP_001181745.1 microcompartments protein VFG1597 Protein 3e-22 63