Gene Information

Name : Sputcn32_2229 (Sputcn32_2229)
Accession : YP_001183749.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2566164 - 2566370 bp
Length : 207 bp
Strand : +
Note : KEGG: shm:Shewmr7_1721 cold-shock DNA-binding domain protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence : 
ATGGCAAGCGGAACTGTTAAATGGTTCAACAACGCCAAAGGATTCGGGTTTATTTGCCCTGATCAAGGTGGTGAGGACGT
TTTTGCACACTATTCTACCATTGAAATGGAAGGCTATAGAACTCTAAAAGCAGGCCAACCCGTTCAATTTGAAGTAGAGC
AAGGTCCAAAAGGGATGCACGCTTCAGCCATTTCACCAACAAAATAA

Protein sequence : 
MASGTVKWFNNAKGFGFICPDQGGEDVFAHYSTIEMEGYRTLKAGQPVQFEVEQGPKGMHASAISPTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 54