|
Name : glcF (Pmen_0201) Accession : YP_001185707.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 203876 - 205093 bp Length : 1218 bp Strand : - Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein DNA sequence : GTGCAGACCAACCTGAGTGAACAAGCCAAACGTCTGCCACGCGCCGAGGAAGCCGAGCGGGTGCTGCGCTCCTGCGTGCA CTGCGGCTTCTGCAACGCCACCTGCCCGACCTACCAGTTGCTCGGCGACGAGCTGGACGGTCCGCGCGGGCGCATCTACC TGATCAAGCAGATGCTCGAAGGCGGCGAAGTGACCGCCAAGACCCAGCAGCACCTGGATCGCTGCCTGACCTGTCGCAAC TGCGAAACCACCTGCCCCTCCGGCGTGCAGTACCACGACCTGCTGGATATCGGCCGCGAGCTGGTCGAACTCACGGTACC GCGGCCGCCGAGCCAACGCCTGCTGCGCCAGGGCCTGCGCGCCGTGGTGCCGCGCCCGGCGCTGTTCAAGGCGCTGACCC AGACCGGTCTGGCCCTGCGCCCGCTGCTGCCGGCCGCGCTCAAGGCCAAGCTGCCGCGCGAGGTTCGTCCGGCCAAGCCG CGCCCGACGCAGCAGCATGCCCGCCGCGTGCTGATGCTCGAAGGCTGCGTGCAGCCGGGGCTGTCGCCCAACACCAACGC CGCCACCGCGCGCGTGCTGGATCGTCTGGGCATCAGCGTCACGCCGATTCGCGAGGCGGGCTGCTGCGGCGCCGTGGACT ACCACCTCAACGCCCAGGAAGCCGGGTTGCAACGCGCGCGGCAGAACATCGACGCCTGGTGGCCGGCCATCGAGGCCGGC GCCGAGGCCATCGTGCAGACCGCCAGCGGCTGCGGCGCCTTCGTCAAGGACTACGGCCACCTGCTCGCCAGCGACCCCGC CTATGCGAGCAAGGCGGCGCGGGTCAGCGCCCTGGCCAAGGACCTAGTCGAGGTGCTGCAAGGCGAGCCGCTGGAGCAGT TGCAGGTGCGCGCCGAGCAGCGCCTGGCCTTCCACTGCCCCTGCACCCTGCAGCATGCGCAGAAGCTCGGCGGTGCGGTG GAGGGCGTGCTGACGCGCCTCGGTTTCGGCCTCACCGCCGTGCCGGACGGCCATCTGTGCTGCGGCTCGGCCGGCACCTA TTCGCTGACCCAGCCGGCGCTGTCGCGGCAGCTGCGCGACAACAAGCTCAACGCCCTGGAAAGCGGCAAACCCGACGCCA TCGTCACCGCCAATATCGGCTGCCAGACCCTTCTGGACGGCGCCGGACGTACGCCGGTGCGGCACTGGATCGAGATCGTC GAAGAGGCGATGGCGTGA Protein sequence : MQTNLSEQAKRLPRAEEAERVLRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQMLEGGEVTAKTQQHLDRCLTCRN CETTCPSGVQYHDLLDIGRELVELTVPRPPSQRLLRQGLRAVVPRPALFKALTQTGLALRPLLPAALKAKLPREVRPAKP RPTQQHARRVLMLEGCVQPGLSPNTNAATARVLDRLGISVTPIREAGCCGAVDYHLNAQEAGLQRARQNIDAWWPAIEAG AEAIVQTASGCGAFVKDYGHLLASDPAYASKAARVSALAKDLVEVLQGEPLEQLQVRAEQRLAFHCPCTLQHAQKLGGAV EGVLTRLGFGLTAVPDGHLCCGSAGTYSLTQPALSRQLRDNKLNALESGKPDAIVTANIGCQTLLDGAGRTPVRHWIEIV EEAMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 2e-146 | 76 |
