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Name : Pmen_0203 (Pmen_0203) Accession : YP_001185709.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 206152 - 207651 bp Length : 1500 bp Strand : - Note : TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein DNA sequence : ATGAGCATTCTGTACGACGAGCGCATCGACGGCGCGCTACCCAAGGTCGACAAGGCCGCGCTGCTGGCCGAGTTGCACCA GCGCCTGCCCGACCTCGACATCCTGCATACCCAGGAAGACCTCAAGCCCTACGAGTGCGACGGCCTGTCCGCCTATCGCA CCACGCCCATGCTGGTGGTGCTGCCCGAGCGCATCCAGCAGGTGCAGCAACTGCTGCAGATCTGCCATGCCCGCGCCGTG CCGGTGGTGGCGCGCGGCGCCGGCACCGGTCTGTCCGGCGGCGCGCTGCCGCTGGAGCAGGGCATCCTGCTGGTGATGGC GCGCTTCAACCAGATTCTCGAGATCAACCGCGAAGGCCGCTTCGCCCGCGTCCAGCCCGGCGTGCGCAACCTGGCGATCT CCCAGGCCGCGGCGCCCTTCGACCTCTATTACGCGCCGGACCCCTCGTCGCAGATCGCCTGTTCCATCGGTGGCAACGTC GCCGAAAACGCCGGCGGCGTGCACTGCCTGAAGTACGGCCTGACCGTGCACAACCTGCTCAAGGTCGACATTCTCACCGT CGAAGGCGAGTTCATGACCCTCGGCAGCGACGCCCTGGACACGCAGGGGTTCGACCTGCTGGCGCTGTTCACCGGCTCCG AGGGCATGCTCGGCATCGTTACCGAGGTGACGGTCAAGCTGCTGCCCAAGCCGCAGGTGGCCAAGGTCCTGCTGGCGGCC TTCGACTCGGTGGAAAAGGCCGGTCGCGCAGTCGGCGACATCATCGCCGCCGGCATCATCCCCGGCGGGCTGGAGATGAT GGACAACCTGGCGATCAGGGCGGCGGAGGACTTTATCCACGCCGGCTATCCGGTGGAGGCCGAGGCCATCCTACTGTGCG AGCTGGACGGCGTGGAAGCCGACGTGGCCGACGACTGCGAGCGGGTGCGCGCGGTGCTGACGAAGGCCGGCGCCATCGAA GTGCGCCAGGCGCGCGACGAGGCCGAGCGGGTGAAGTTCTGGGCCGGGCGCAAGAACGCCTTCCCCGCGGTCGGGCGCAT CTCGCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAGCTGCCCGGCGTGCTGCGCGGCATCGCCGAATTGT CCGCCGAATACGGCCTGCGCGTGGCCAACGTGTTCCACGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCGATGCC AACGTGCCCGGCGAGCTGGAGCGGGCCGAAGCCATCGGCGGCAAGATCCTCGAACTCTGCGTCAAGGTCGGCGGCAGCAT CACCGGCGAGCACGGCGTGGGCCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAAATCACCCTGTTCC ATGCGGTGAAGGCGGCGTTCGACCCGGCCGGCCTGCTCAACCCGGGCAAGAACATCCCCACCCTGCACCGCTGCGCCGAG TTCGGCGCCATGCACGTGCACCACGGCCAACTGCCCTTCCCGGAACTGGAGCGTTTCTGA Protein sequence : MSILYDERIDGALPKVDKAALLAELHQRLPDLDILHTQEDLKPYECDGLSAYRTTPMLVVLPERIQQVQQLLQICHARAV PVVARGAGTGLSGGALPLEQGILLVMARFNQILEINREGRFARVQPGVRNLAISQAAAPFDLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKVDILTVEGEFMTLGSDALDTQGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVAKVLLAA FDSVEKAGRAVGDIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVEAEAILLCELDGVEADVADDCERVRAVLTKAGAIE VRQARDEAERVKFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPGVLRGIAELSAEYGLRVANVFHAGDGNMHPLILFDA NVPGELERAEAIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPAGLLNPGKNIPTLHRCAE FGAMHVHHGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 82 |
