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Name : rnhA (Pmen_2066) Accession : YP_001187559.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 2288235 - 2288687 bp Length : 453 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGTCTGAAACCGATGAAGTGGTGATCTACACCGACGGCGCCTGCAAGGGCAATCCCGGCCCCGGAGGCTGGGGGGCGTT GCTGGTCTACAAGGGCGTGGAAAAGGAGTTGTGGGGCGGGGACCCCAGCACCACCAACAACCGCATGGAGCTGATGGCGG CGATTGCCGGCCTGATCGCCCTGACCCGGCCCTGCTCGGTCAAGCTGGTGACCGATTCGCAATATGTGATGAAGGGCATC CAGGAATGGCTGCCGAACTGGAAGAAGCGCGGCTGGAAGACCGCCTCGAAAGAGCCGGTGAAGAATGCCGACCTCTGGCA GAAGCTGGATGAAGAGGTCAACCGTCATCAGGTCAGTTGGCAGTGGGTGCGTGGGCACACCGGCCATCCGGGCAACGAGC GCGCCGATCAGCTGGCCAACCGTGGCGTCGACGAGGTGCGCTCGGCGCGCTGA Protein sequence : MSETDEVVIYTDGACKGNPGPGGWGALLVYKGVEKELWGGDPSTTNNRMELMAAIAGLIALTRPCSVKLVTDSQYVMKGI QEWLPNWKKRGWKTASKEPVKNADLWQKLDEEVNRHQVSWQWVRGHTGHPGNERADQLANRGVDEVRSAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-39 | 60 |
