Gene Information

Name : Pmen_2789 (Pmen_2789)
Accession : YP_001188276.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 3069440 - 3070195 bp
Length : 756 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein

DNA sequence :
ATGAACTGGACCTGGTTTCACAAATGGGGTTCGCCCAAGTGGTTCTATGAGATGAGCGGTCGCTGGCTGCCCTGGCTGAG
CATCGCCGCGGTGCTGCTGATCGTCTCCGGCCTGGTCTGGGGCCTGGCCTTCGCACCGCCGGACTACCAGCAGGGCAACA
GCTTCCGCATCATCTACATCCACGTGCCTGCGGCGTTCCTCGCCCAGTCCATCTACGTGACGCTGGCCATCGCTGGCCTG
GTGGGCCTGGTCTGGAAGATGAAACTGGCCGACGTCGCCCTGCAGCAGGCCGCGCCCATCGGTGCCTGGATGACCGCCAT
TGCGCTGCTCACCGGCGCCATCTGGGGCAAGCCGACCTGGGGCACCTACTGGGTGTGGGACGCGCGCCTGACCTCGATGC
TGATCCTGCTGTTCCTCTACTTCGGCGTCATCGCCCTGGGCAACGCCATCAGCAACCGCGACAGCGCCGCCAAGGCCTGC
GCCGTGCTGGCCATCGTCGGCGTGGTGAACATTCCGATCATCAAGTACTCGGTGGAGTGGTGGAACTCGCTGCACCAGAC
CGCCACCTTCAAGATCACCGAGAAGCCGGCCATGCCGGTGGAAATGTGGCTGCCGCTGCTGCTGGCGGTGCTGGGCTTCT
ACTGCTTCTTCGGCGCCGTGCTGCTCTATCGCATGCGCCTGGAGGTGCTCAAGCGCGAGGCACGCAGCAGCTGGGTGAAG
ACCGAAGTGCAGAACCTCGTGGAGGGCAAGGCATGA

Protein sequence :
MNWTWFHKWGSPKWFYEMSGRWLPWLSIAAVLLIVSGLVWGLAFAPPDYQQGNSFRIIYIHVPAAFLAQSIYVTLAIAGL
VGLVWKMKLADVALQQAAPIGAWMTAIALLTGAIWGKPTWGTYWVWDARLTSMLILLFLYFGVIALGNAISNRDSAAKAC
AVLAIVGVVNIPIIKYSVEWWNSLHQTATFKITEKPAMPVEMWLPLLLAVLGFYCFFGAVLLYRMRLEVLKREARSSWVK
TEVQNLVEGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 8e-42 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2789 YP_001188276.1 heme exporter protein CcmC VFG1856 Protein 3e-47 47