Gene Information

Name : Pmen_0303 (Pmen_0303)
Accession : YP_001185809.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 311710 - 312441 bp
Length : 732 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGTCACTGCTTAACGTCACCGCCCTGCACAAGTATTACGGCGACAACCATGTGCTCAAGGGCATCGACCTCAAGGTCGA
GGAAGGCGAAGTGGTCGCCATCATCGGCCGCAGCGGCTCGGGCAAGAGCACCTTCCTGCGCACCCTCAACGGCCTGGAAT
CGATCAACGACGGCGTGATCGAAGTCGACGGCGAGTACATCGACGCCGCCCGCGCCGATCTGCGCAGCCTGCGGCAGAAG
GTCGGCATGGTGTTCCAGCAGTTCAACCTGTTCCCCCATCTGACCGTCGGCGAGAACGTCATGCTGGCGCCGCAGGTGGT
GAAGAAGACTGCGCGCGCCGAAGCCGAGCGGATCGCCCGGCAGATGCTCGAGCGGGTCGGCCTGGCGGAGAAGTTCGACG
CCTACCCCGAGCGCCTGTCGGGCGGCCAACAACAGCGCGTGGCCATCGCCCGCGCCCTGGCCATGTCGCCCAAGGTGCTG
CTGTGCGACGAGATCACCTCGGCGCTCGATCCCGAACTGGTCAACGAGGTGCTGGCGGTGGTCAAGCAACTGGCCAGCGA
GGGCATGACCCTGATCATGGTCACCCACGAGATGCGCTTCGCCCGCGAAGTCGGCGACAAGCTGGTGTTCATGCATCAGG
GCAAGGTGCACGAGATCGGCGATCCGAAAGCCCTGTTCGCCGCGCCGCAGACCGAGGAGCTGCGTAACTTCATCGGCTCG
GTGAACCTGTGA

Protein sequence :
MSLLNVTALHKYYGDNHVLKGIDLKVEEGEVVAIIGRSGSGKSTFLRTLNGLESINDGVIEVDGEYIDAARADLRSLRQK
VGMVFQQFNLFPHLTVGENVMLAPQVVKKTARAEAERIARQMLERVGLAEKFDAYPERLSGGQQQRVAIARALAMSPKVL
LCDEITSALDPELVNEVLAVVKQLASEGMTLIMVTHEMRFAREVGDKLVFMHQGKVHEIGDPKALFAAPQTEELRNFIGS
VNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_0303 YP_001185809.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-26 43