Gene Information

Name : Pmen_3523 (Pmen_3523)
Accession : YP_001189003.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding protein family protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3882691 - 3882903 bp
Length : 213 bp
Strand : +
Note : PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTCGAATCGTCAGAACGGTACCGTCAAGTGGTTTAACGACGAGAAAGGTTTTGGTTTTATCACTCCCGAGAGCGGTCC
GGATCTGTTCGTGCACTTCCGCGCGATCGAAGGTAACGGCTTCAAGAGCCTGAAAGAAGGCCAGAAAGTCAGCTTCATCG
CTGTGCAAGGTCAAAAAGGCATGCAGGCCGACCAGGTTCAGATCCTGGGCTGA

Protein sequence :
MSNRQNGTVKWFNDEKGFGFITPESGPDLFVHFRAIEGNGFKSLKEGQKVSFIAVQGQKGMQADQVQILG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 55