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Name : Pmen_0038 (Pmen_0038) Accession : YP_001185544.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : TyeA family type III secretion effector delivery regulator Function : - COG functional category : - COG ID : - EC number : - Position : 36171 - 37328 bp Length : 1158 bp Strand : + Note : TIGRFAM: type III secretion effector delivery regulator, TyeA family; type III secretion regulator YopN/LcrE/InvE/MxiC DNA sequence : ATGATCAGACCTATCCCCAACGCCAGCTCGATCCTGCACATACCGTCTGTCGCCCGTGCAGCATCCCCTGCCACTCCCCT TGCGCAGGTTCGGTCAGGTGCTGCGACCACCACTGGCACGAGTGCCCAGCAAGCCTCGAAATTCGCCGCCGCGCTGGTAC AGAACAGCCGCGAGTTGGGGCGTCGTGATCTGTTCGCCAAGATCAATGCTCTGCAATCCCAGGCAAGCAAGCAGCATGAG TTGGCCCACCTGCTGCTGGCGACCCATGAACGGGGCATGGAGGAGTCGGCTCGTGCACTGCGCAAGACGCTGAAGAACGG CCAACTGCTGCGAATGGAGCGGGGCAAGCTGCTCAAGCAGATCGTCGACAGCATGGCGGGCGATGCAGCCAAGGCCCATG CCCTGTTGCAGGCGGCGGCTCGACAGGCCAAGGGCGAGAAGTCGCTCAATGAACAGCAGGCGCTGAATCAGCAACTCCAG CTCTTGCGGCAACAGCATGGGCGCAATCCCCGGCCTCTGTTCAATACGGGTAACAACACCAGGATCCTGGCGCGCGGAGG CGAGGATCCTCAGCGGCGAGACAAGCTGCGCAGCCTCTACAGCGTTGCGGTGACCGAACAGCTGAACGTGGTCGGGCTGA TCGAGGCTCTGCTGAATAGCACCCAGGACGATGGGCAGAAGGATGGCCGCGAAGGCTTCGAAGCCGTCCTGCGCGAGATC CGCCAGGTCGTGGCGCGCGACATGGCGGAACTCGATGGCAGCGCATCACCACAGAAACTGCGAACCATGATGTACGCCAT GAGTACGGCGCAGTACGTGGCAACCCTGTTCGGTGGCTGCGAACACCTGCTGGGCCGCATGCGCAACAAGAATCCCGCCA TGCAGGTTGAGACCTCGGCGTTTCTCAAGAACCTGCTGGGGCTGATCGGCAAGGGCATGGCGCTGAACGACACCCTTCAG CTGACGCAGCAGATCGGCGGTCGGCAACTCAAGCACCAGCTGGCGTTCCTCAACGGGCTGCGCCCGATGCTGCATCAGCT GCCAATCATGCTATGGCGCGACATCAAGAGCCGACAGAACGCGCTGGGTAATCTGCTCTCGCTGATGGCGGCGTTGACCA GTGAAGAGCAGAAGCGCCTCAAGGAGGGCATCGCCTGA Protein sequence : MIRPIPNASSILHIPSVARAASPATPLAQVRSGAATTTGTSAQQASKFAAALVQNSRELGRRDLFAKINALQSQASKQHE LAHLLLATHERGMEESARALRKTLKNGQLLRMERGKLLKQIVDSMAGDAAKAHALLQAAARQAKGEKSLNEQQALNQQLQ LLRQQHGRNPRPLFNTGNNTRILARGGEDPQRRDKLRSLYSVAVTEQLNVVGLIEALLNSTQDDGQKDGREGFEAVLREI RQVVARDMAELDGSASPQKLRTMMYAMSTAQYVATLFGGCEHLLGRMRNKNPAMQVETSAFLKNLLGLIGKGMALNDTLQ LTQQIGGRQLKHQLAFLNGLRPMLHQLPIMLWRDIKSRQNALGNLLSLMAALTSEEQKRLKEGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpJ | AAG33876.1 | HrpJ | Virulence | Hrp PAI | Protein | 4e-62 | 53 |
| hrpJ | NP_791230.1 | type III secretion protein HrpJ | Virulence | Hrp PAI | Protein | 5e-62 | 53 |
| hrpJ | ABQ88351.1 | HrpJ | Virulence | Hrp PAI | Protein | 2e-57 | 52 |
| hrpJ | AAT96192.1 | HrpJ | Virulence | T-PAI | Protein | 4e-58 | 50 |
| hrpJ | AAT96138.1 | HrpJ | Virulence | T-PAI | Protein | 3e-58 | 50 |
| hrpJ | AAR25630.1 | type III secretion protein HrpJ | Not tested | Not named | Protein | 1e-46 | 48 |
