|
Name : Pmen_0459 (Pmen_0459) Accession : YP_001185961.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : D-erythrose-4-phosphate dehydrogenase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.12 Position : 489134 - 490201 bp Length : 1068 bp Strand : + Note : TIGRFAM: D-erythrose-4-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase DNA sequence : ATGTCCAACCGTCCCTACCGCGTCGCCCTCAATGGCTATGGCCGCATCGGTCGCTGCGTGCTGCGCGCGCTGCACGAGCG CGGCGCCGGGGCGGGCCTGGAAATCGTCGCGCTGAACGACCTGGCCGATCAGGCCAGCATCGAATACCTGACCCGTTTCG ACTCCACCCACGGGCGCTTTCCCGGTGAGGTGAAGGTGGATGGCGACTGCCTGCACATCAACGGCGACTGCGTGAAGGTG TTGCGCCAGCGCGAGCCCGAGGCCATCGACTGGGCGGCGCTGGATATCGATCTGCTGCTGGAATGCTCTGGCCAGTACGT CACCCGTGCCGAGGCGCAGCGTTTCATCGACGCCGGGGCGCCGCGTCTGTTGCTGTCGCAGCCCATGGCCAGCGAGGCGG ATATCGACGCCACGGTGGTCTACGGGGTCAACCAGGCCTGCCTGAGCGGCAGCGAGCTGCTGGTGTCCAACGCCTCCTGC ACCACCAACTGCAGCGTGCCGCTGTTGAAACTTCTCGACGAGTCGGTGGGTCTGGAATACGTCTCCATTACCACCATTCA CTCGGCGATGAACGATCAACCGGTTATTGATGCCTACCACCACGAAGACCTGCGCCGTACGCGCTCGGCCTTCCAGTCGG TGATTCCGGTGTCCACCGGTCTGGCCCGCGGTATCGAGCGCCTGCTGCCGGAGCTGGCCGGGCGCGTCCAGGCCAAGGCC ATCCGCGTGCCGACGGTGAACGTGTCCTGCCTGGACATCACCCTGCAGACCGCGCGCGACACCAGTGCCGCCGAGATCAA CAGCGTGTTGCGTCAGGCCGCCGAGGCCGGTCCGCTCAAGGGCCTGCTGGCCTACACCGAGCTGCCCCACGCCAGCTGCG ATTTCAACCACGACCCGCACTCGGCCATCGTCGACGGCAGCCAGACCCGCGTGTCCGGCCCGCGCCTGGTCAACCTGCTG GCCTGGTTCGACAACGAGTGGGGCTTCGCCAACCGCATGCTCGATGTCGCCGAACATTTTCTCGCTGTATCCACTTCCTC CGTACAACCAGCCCCCGTGAAGGACTGA Protein sequence : MSNRPYRVALNGYGRIGRCVLRALHERGAGAGLEIVALNDLADQASIEYLTRFDSTHGRFPGEVKVDGDCLHINGDCVKV LRQREPEAIDWAALDIDLLLECSGQYVTRAEAQRFIDAGAPRLLLSQPMASEADIDATVVYGVNQACLSGSELLVSNASC TTNCSVPLLKLLDESVGLEYVSITTIHSAMNDQPVIDAYHHEDLRRTRSAFQSVIPVSTGLARGIERLLPELAGRVQAKA IRVPTVNVSCLDITLQTARDTSAAEINSVLRQAAEAGPLKGLLAYTELPHASCDFNHDPHSAIVDGSQTRVSGPRLVNLL AWFDNEWGFANRMLDVAEHFLAVSTSSVQPAPVKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 1e-74 | 50 |
