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Name : Pmen_0097 (Pmen_0097) Accession : YP_001185603.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 92959 - 95559 bp Length : 2601 bp Strand : + Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGATCAACGTCGACCTGCAACAACTGGTTCAAGCTCTGGACGCCGCGAGCAAGCGCGACCTGGAGATGGCCGCCGAACG CTGCGTGGTACGCGGCGGCAACAAGATCCTCGTCGAGGACCTGCTGCTGGGTCTGCTCGAGCGCCCGGAAAGCCTGCTGG CGCGTGCCCTGCAGGATGCCGAGATCGATGCCGGCGAGCTGGCCCAGGCGCTGCAGCCGCGCGGCGAGCACAGCGAGTCG CGCAACCCGGTGTTTTCTGCCGAACTGGTGCAGTGGCTGCAGGACGCCCTGCTGGTGGCCAACCTGGAGCTGGGCGCCAG CCAGATCGACCAGGCCGCGCTGATCCTCGCCCTGCTGCGCAACCCCATGCGCTACGCCGGCAGCCGTTATCAGACGCTGC TGAGCAAGCTCAATGCCGAGCGTCTGCGCGACTTCGCCCTTAGCCAGCAGCCGCAGGCCGCGGGCGGCAAAGCGGCGGCG CCGGGCGAGTCGAACCTGGCGCGCTTTACCCACAACTTCACCCAGCAGGCCCGCGACGGCAAGCTCGATCCGGTGCTGTG CCGCGACGGCGCGATCCGCCAGATGGTCGATATCCTCGCCCGCCGGCGCAAGAACAACCCCATCGTGGTCGGCGAGGCCG GGGTGGGCAAGACCGCCATCGTCGAGGGCCTGGCCCTGCGCATCGCCACCGGCGAGGTACCGCAGGTGCTCAAGGGCGTC GAGCTGCTGTGCCTGGACCTCGGCCTGCTGCAGGCCGGCGCCAGCGTCAAGGGCGAGTTCGAGCGCCGCTTGCAGGGCGT GATCGACGAGGTCAAGGCCTCGCCCAAGCCGATCATCCTGTTTATCGACGAGGCCCATACGCTGATCGGGGCCGGTGGCC AGGCCGGCAGCGGCGATGCCGCCAACCTGCTCAAGCCGGCGCTGGCCCGTGGCGAGCTGCGCACCATCGCCGCCACCACC TGGAGCGAATACAAGAAGTACTTCGAGAAGGACCCGGCGCTGGCCCGTCGCTTCCAGCCGGTGCAACTGCACGAGCCGAC CGTCGACGAGGCGGTGACCATCCTGCGCGGCCTGGCGCCGGTGTACGAGAAGAGCCACGGCATCTACCTGCGCGACGACG CCGTGGTCGCCGCCGCCGAGCTGTCGGCGCGCTACCTGGCCGGTCGCCAGTTGCCGGACAAGGCGGTGGACGTACTCGAC ACCGCCTGCGCCCGCGTGCGCATCAGCCTGGCCGCCGCACCCGAGGCGCTGGAGCGCCTGCGCGGCGAGATCGCCGAGGG CGAGCGCCAGGGCGAGGCCATGCGCCGCGACCTGGACGCTGGCCTGAGCATCGACGGCGAAGCGCTGGATGCCCTGGAAA CCCGCCTGGTCGCCGCGCGCGCCGAACTGGAGCAGGTGGAAACCCGCTGGGCGATCCAGCGCGACCTGGCCGAGCGCCTG CTCGAGCAGCGCAAGCAGTGCGCCGCGGCGCGTCTTGCTGGCGACGCAGAGGAAACCGACGAGCCACGTGCCAGCCTGGA GGAACTGGAAGCCGAGCTGCGCGCCCTCCAGGCCGAGCTGGCCGCGGCTCAGGCCAGCGAGCGCCTGGTCAGCTTCGAGG TCTGCCCGCGCCTGGTGGCCGAGGTGATCAGCCACTGGACCGGCGTGCCGCTGAGCCAGCTGGCGCGCGAGCACAACACC AAGGTCATCACCTTCGCCGACGACCTGCGCCAGCGCGTGCGCGGCCAGGAGCAGGCGATCCAGGCGCTGGACAAGGCCAT GCGCGCCACCGCTGCCGGCCTCAACCGGCCCGATGCGCCAGTGGGCGTGTTCCTCCTGGTCGGCCCCAGCGGCGTCGGCA AGACCGAGACCGCCCTGGCCCTGGCCGACCTGCTGTATGGCGGTGAACGCTTCCTCACCGTGATCAACATGTCCGAGTTC CAGGAAAAACATACCGTCTCGCGTCTGATCGGCGCGCCGCCCGGCTACGTCGGCTACGGCGAAGGCGGCATGCTCACCGA AGCCGTGCGGCAGAAGCCCTACTCGGTGATCCTCCTCGACGAGGTGGAGAAGGCCGACCCCGACGTGATGAACGTCTTCT ACCAGATCTTCGACAAGGGCGTGGCCAACGACGGCGAAGGGCGCGAGATCAACTTCCGCAACACCCTGATCCTGATGACC AGCAACCTGGCCAGCGAACGCATCGCCAGCCTGTGCGCCGGTGGTGAGCGCCCGGGGGCCGAGGACCTGGAGCTGGCCAT CCGCCCGCAACTGACCCAGCACTTCAAGCCGGCCCTGCTCGGCCGTATGCGCGTGGTGCCCTACTACCCCATGGACGGCG ACCTGCTGCGCCAGCTGGTCGGCCTCAAGCTGGCCCGTTTCGGCGAGCGCCTGGCCCGTCGCCAGCTCGCCTTCAGCCAC TGCGACGGCCTGGTCGAGCACCTGGCCGAGCGCTGTACCCATGGCGACAGCGGCGCCCGTCTGATCGACCACCTGATCGA CCAGCACCTGCAGCCGCTGGTGGTCGACCGCCTGCTCGACGCCATGGCGAGCGGCGAGACCTTGCAGCAGGTACGCGCCA CCCTGAACGGTGAAGGAACGGTGGTCTGTGAGTTCGCTTAA Protein sequence : MINVDLQQLVQALDAASKRDLEMAAERCVVRGGNKILVEDLLLGLLERPESLLARALQDAEIDAGELAQALQPRGEHSES RNPVFSAELVQWLQDALLVANLELGASQIDQAALILALLRNPMRYAGSRYQTLLSKLNAERLRDFALSQQPQAAGGKAAA PGESNLARFTHNFTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIATGEVPQVLKGV ELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQAGSGDAANLLKPALARGELRTIAATT WSEYKKYFEKDPALARRFQPVQLHEPTVDEAVTILRGLAPVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLD TACARVRISLAAAPEALERLRGEIAEGERQGEAMRRDLDAGLSIDGEALDALETRLVAARAELEQVETRWAIQRDLAERL LEQRKQCAAARLAGDAEETDEPRASLEELEAELRALQAELAAAQASERLVSFEVCPRLVAEVISHWTGVPLSQLAREHNT KVITFADDLRQRVRGQEQAIQALDKAMRATAAGLNRPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEF QEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMT SNLASERIASLCAGGERPGAEDLELAIRPQLTQHFKPALLGRMRVVPYYPMDGDLLRQLVGLKLARFGERLARRQLAFSH CDGLVEHLAERCTHGDSGARLIDHLIDQHLQPLVVDRLLDAMASGETLQQVRATLNGEGTVVCEFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-119 | 47 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-142 | 45 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-142 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmen_0097 | YP_001185603.1 | ATPase | VFG2076 | Protein | 4e-147 | 51 |
| Pmen_0097 | YP_001185603.1 | ATPase | VFG2084 | Protein | 1e-143 | 48 |
