Gene Information

Name : BRADO2764 (BRADO2764)
Accession : YP_001204812.1
Strain : Bradyrhizobium sp. ORS278
Genome accession: NC_009445
Putative virulence/resistance : Virulence
Product : toxin secretion ABC transporter ATP-binding and membrane protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : 3.6.3.-
Position : 2972388 - 2974502 bp
Length : 2115 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11755084, 7830567, 1552901; Product type t : transporter

DNA sequence :
ATGCAGGCGTGTACGGATCAGGGCGCATGGGCGCTGGCGCTGTCATTGCACCTGCTCGGCATCGTCGCCGATCCCGGCCG
CATCCAGCACGAGGCCGGCCGCAGCGATGCGCTCTCGGTCGACGATCTCCTGCGCGCCACCGCGCGCTTTCCCGTCAAGG
CCAGGCTCATCAGCTCGAAGGTCGCGCGGCTGAAGTCCACGCCGCTGCCGACCATGGCCGTGCTGAAGGACGGCTTCGCC
GTGATCGGCAAGGTGACCGAGACGGGCGTGCTGATCCAGGGGCTGAACGATGCCGGACCGCGCCTGCTGAGCTTTCCCGA
GTTCGAGGCGATCTGGTCCGGACAACTCATCCTGATCGCCAAGCGCGCGGAGCTCTCCGACACCGCACGCCGTTTCAATT
TCAGCTGGTTCGTCGGAGCAATCGGCAAGTATCGCCGCATCCTGATCGAGGTGCTGCTGGCCTCGTTCGTGATCCAGCTG
TTCGGCCTCGCGACCCCGATGATCTTCCAGGTCGTGATCGACAAGGTGCTGGTGCATCGCGGCCTGTCGACTTTGGAGGT
GATGGTCGCGGGGCTCGCGCTGATCGCGCTGTTCGAGGCGGTGCTGTCGGGCCTTCGCACCTATCTGTTCACCCACACCT
CGAACCGCATCGACGTCGAGCTCGGTGCGCGGCTGTTCCGGCACCTGATGCGGCTGCCGCTGGCCTATTTCGAGAGCCGC
CGCGTCGGCGACAGCGTCGCGCGGGTGCGCGAGCTCGAGACGATCCGGCAATTCATCACCTCGTCCTCGATCACGCTGGT
GCTCGATCTCGCTTTTGCCGCGGTCTTCATCGGCGTGATGTTCCTGTACAGCTCCACGCTTGCGTGGATCGTGTGTGCGA
CCCTACCGGTCTATGCGCTGCTGTCGCTCGCGACGACGCCGGCGTTCCGCGCACGGCTCGACGAGAAATTCCGGCGCGGC
GCCGAGAACCAAGCCTTCCTGGTCGAGAGCGTTACCGGCGTCGAGACCATCAAGGCGATGGCGGTCGAGCCGCTGATGCA
GCGGCGATGGGAGGAGCAGCTCGCGAGCTATGTCGGCGCCTCGTTCCAGGCTTCGCAGATCGGCAACTGGGCGAGCCAGG
CGGCGAGCCTGCTCAACAAAGGCGTCGGCGCGCTGACGCTCTTCGTGGGCGCAGGGCTCGTGATCGCCAACAGGATGACG
GTCGGCGAGCTCGTCGCCTTCAACATGCTGGCCAATCAGGTGTCGGGTCCGGTGCTGCGCCTGGTCCAGGTCTGGCAGGA
CTTCCATCAGGTGCGGCTGTCGGTCGAGCGGCTCGGCGACATCCTCAACACGCCAGTCGAAGCGCAGAGTGGTGGCGCCG
AGCAGAACCTGCCGCCGCTCGAGGGCGCCATCGAGTTCGAGCGTGTGACCTTCCGCTACGCCCTCAAAACCCAGCCGGTG
CTGCGCGAGGTCTCGCTCAGGATCGGGGCAGGGCAGGTGGTCGGCATCGTCGGGCCGTCCGGCTCGGGCAAGAGCACCAT
CGCCAAGCTGGCGCAGCGGCTGTACCAGCCGGAAGCGGGCCGCGTGCTGGTCGACGGCGTCGACACCGCGGTGCTCGATC
CCTCATGGCTGCGGCGGCAGATCGGCGTGGTGCTGCAGGAGAACGTCCTGTTCAACCGCTCGGTGCGCGACAACATCGCG
CTCGCAGATCCCGCGCTGCCGATGGAGCGGATCGTCGAGGCGGCCAAGCTTGCCGGCGCGCACGAGTTCATCTGCCGGAT
GCCACAAGGCTATGACACGGTGATCGGCGAGCGGGGCGTGTCGCTGTCCGGCGGCCAGCGCCAGCGCATCGCGATCGCGC
GCGCACTGGTCGGCGATCCCCGCATCCTCATTTTCGACGAGGCGACCTCGGCGCTCGACTACGAGTCCGAGAGCATCATC
CAGGCCAACATGCGCGATATCGTCCGTGGCCGCACCGTGCTGATCATCGCGCACCGGCTATCGACCGTGCGCAAAGCCGA
TCGCATCCTGACGATCGAGAGCGGCGTCATAGTCGAGGACGGGACCCACGAGCAGCTGGTCGCCGGGGGCGGCCGTTATG
CGACCCTGCACCGGATCCAGTCCGCGGGCCGCTGA

Protein sequence :
MQACTDQGAWALALSLHLLGIVADPGRIQHEAGRSDALSVDDLLRATARFPVKARLISSKVARLKSTPLPTMAVLKDGFA
VIGKVTETGVLIQGLNDAGPRLLSFPEFEAIWSGQLILIAKRAELSDTARRFNFSWFVGAIGKYRRILIEVLLASFVIQL
FGLATPMIFQVVIDKVLVHRGLSTLEVMVAGLALIALFEAVLSGLRTYLFTHTSNRIDVELGARLFRHLMRLPLAYFESR
RVGDSVARVRELETIRQFITSSSITLVLDLAFAAVFIGVMFLYSSTLAWIVCATLPVYALLSLATTPAFRARLDEKFRRG
AENQAFLVESVTGVETIKAMAVEPLMQRRWEEQLASYVGASFQASQIGNWASQAASLLNKGVGALTLFVGAGLVIANRMT
VGELVAFNMLANQVSGPVLRLVQVWQDFHQVRLSVERLGDILNTPVEAQSGGAEQNLPPLEGAIEFERVTFRYALKTQPV
LREVSLRIGAGQVVGIVGPSGSGKSTIAKLAQRLYQPEAGRVLVDGVDTAVLDPSWLRRQIGVVLQENVLFNRSVRDNIA
LADPALPMERIVEAAKLAGAHEFICRMPQGYDTVIGERGVSLSGGQRQRIAIARALVGDPRILIFDEATSALDYESESII
QANMRDIVRGRTVLIIAHRLSTVRKADRILTIESGVIVEDGTHEQLVAGGGRYATLHRIQSAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-177 51
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 3e-177 51
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 3e-177 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRADO2764 YP_001204812.1 toxin secretion ABC transporter ATP-binding and membrane protein VFG1269 Protein 0.0 54
BRADO2764 YP_001204812.1 toxin secretion ABC transporter ATP-binding and membrane protein VFG1501 Protein 2e-177 51
BRADO2764 YP_001204812.1 toxin secretion ABC transporter ATP-binding and membrane protein VFG0907 Protein 1e-177 51
BRADO2764 YP_001204812.1 toxin secretion ABC transporter ATP-binding and membrane protein VFG1557 Protein 2e-177 51
BRADO2764 YP_001204812.1 toxin secretion ABC transporter ATP-binding and membrane protein VFG0841 Protein 1e-172 51