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Name : glcD (BRADO6131) Accession : YP_001207996.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 6358221 - 6359714 bp Length : 1494 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183, 9880556; Product type e : enzyme DNA sequence : ATGGCCATCATGATGCCGGAAGCTGATCAGGCGGTGCTGGCGCGCCGCGGCGACATCGTCGCTGCACTGCGCGCGATCGT GCCGGGCGAGGGCGTCATCGACAGTGCCGCCGAGATGCTGCCCTATGAGTCCGACGGATTGATGGCCTATCGCCAGCCGC CGATGGTCGTGGTGCTGCCGGAGACCACGGCACAGGTTTCGCAGGTTCTGAGATATTGCCACGGCCAAGGCATCAAGGTG GTTCCGCGCGGCTCCGGAACCTCGCTGTCCGGCGGTGCCTTGCCGCTGGCTGATGGCGTGCTGCTTGGGCTGGGCAAGTT CAAGCGCATCCGCGAGATCGACTTCGATAACCGCGTCGTCGTCACCGAGCCTGGAGTCACCAACCTCGCCATCAGCCAGG CGGTGGCGCATGCCGGCTTCTACTACGCGCCCGACCCGTCGTCGCAGATCGCCTGCTCGATCGGCGGCAATGTCGCGGAG AATTCCGGCGGCGTGCACTGCCTGAAATACGGCATGACCACCAACAACGTGCTCGGCTGCGAGCTCGTGCTGATGAATGG CGAGGTGTTGCGCATCGGAGGCAAGTGCACGGAGAATGCCGGCTATGATCTGATGGGCCTGATCACCGGCTCGGAGGGGC TGCTCGGCGTGGTCACCGAGGTCACCGTGCGCATCCTGCAAAAACCGGAGACGGCGCGCGCGCTGATGGTCGGCTTCACG CAAGTCGAGGCCGCCGGCGAATGCGTCGCGCGCATCATCGGCGCCGGCATCATCCCCGGCGGCATGGAGATGATGGACAA GCCGGCGATCCACGCCGCCGAGGCCTTCGTCCATGCCGGCTATCCGCTCGACGTCGAGGCGCTCTTGATCATCGAGCTCG ACGGCCCCGGCGTCGAGGTCGACGAGCTGATCAGTCGCGTCGAGGCCATCGCCAACGGCTGCGGCTCGACCACCTGCCGG ATCTCCACCTCCGAGGCCGAGCGCAACCTGTTCTGGGCCGGCCGCAAGGCGGCGTTCCCCGCGGTCGGGCGCATCTCGCC GGACTATCTCTGCATGGACGGCACCATCCCGCGCGGCGCGCTGCCGAAGGCGCTCGCGCGCATCCGCGAGCTGTCGGAAA AATATCAGCTCGGCTGCGCCAACGTCTTCCATGCCGGCGACGGCAATCTGCATCCGCTGATCCTCTACGACGCCAACAAG CCCGGCGAGATGGAGCGCGCCGAAGCCTTCGGCGCCGACATCCTGCGCTGCTGCGTCGAGCTCGGCGGCGTCCTCACCGG CGAGCACGGTGTCGGCATCGAGAAGCGCGACCTGATGCCCGACATGTTCACCGAGATCGACCTCAACCAGCAGCAGCGCG TGAAATGCGCGTTCGATCATTTGGGCCTGCTGAATCCGGGCAAGGTGTTTCCGACCCTGCACCGCTGCGCCGAGCTCGGA CGGATGCACGTGCACGCCGGCAAGCTGGCGTTTCCGGATCTGCCGCGGTTCTGA Protein sequence : MAIMMPEADQAVLARRGDIVAALRAIVPGEGVIDSAAEMLPYESDGLMAYRQPPMVVVLPETTAQVSQVLRYCHGQGIKV VPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRVVVTEPGVTNLAISQAVAHAGFYYAPDPSSQIACSIGGNVAE NSGGVHCLKYGMTTNNVLGCELVLMNGEVLRIGGKCTENAGYDLMGLITGSEGLLGVVTEVTVRILQKPETARALMVGFT QVEAAGECVARIIGAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPGVEVDELISRVEAIANGCGSTTCR ISTSEAERNLFWAGRKAAFPAVGRISPDYLCMDGTIPRGALPKALARIRELSEKYQLGCANVFHAGDGNLHPLILYDANK PGEMERAEAFGADILRCCVELGGVLTGEHGVGIEKRDLMPDMFTEIDLNQQQRVKCAFDHLGLLNPGKVFPTLHRCAELG RMHVHAGKLAFPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-126 | 58 |
