|
Name : BRADO6201 (BRADO6201) Accession : YP_001208064.1 Strain : Bradyrhizobium sp. ORS278 Genome accession: NC_009445 Putative virulence/resistance : Virulence Product : toxin secretion ABC transporter ATP-binding and membrane protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : 3.6.3.- Position : 6439086 - 6441212 bp Length : 2127 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11755084, 7830567, 1552901; Product type t : transporter DNA sequence : ATGACCGCGAGGCAGAACGATACGGGGCTCGACTGCCTGACATTGCTGTTGCGGTTCCATCAGGTCGCGGTTGATCCGGC GCAGATTGCCCACCAGCTGGCGGGCGCGAAGGTCAGCGTCAACGAGATGCTGCGCTGTTCGCGTCAGCTGAAGCTCAAGG CGCGCGCTGTTCGGCAGACATGGGATGGCCTTGCCAAGCTGCCGCTTCCGGCCATCGCAGCGCGGGCCGACGGCTCGTTC GTCATTCTCGGCCAAGTCACGGCCGAGACGGCGCTAGTCCAAGATCCGCTCGTCAATCGGCCGCAGAGTCTCAAGCGCGC CGAGTTCGAGGCCAACTGGACTGGCACGATCGTGCTGATGGCCCGCCGGGCGTCGCTGACGGATCTGGCGCGGCGTTTCG ACGTCACCTGGTTCCTGCAGGCGATGCACAAATATCGCCGGCTGCTCGGCGAGGTGCTGCTGGCCTCGTTCTTCCTGCAG CTGTTCGGCCTGGTGACGCCGCTGTTCTTCCAGGTCGTCACCGACAAGGTGCTGACCCATCGCGGCTACACCACGCTCGA TGTGCTGGTGTTCGGCTTGGTTACCGTAACGATTTTCGAGACCGCGTTGGGCGGTCTTCGAACGTATGTGTTCTCGCACA CCACGAATCGCATCGATGTCGAGCTGGGCGCGCGGCTGTTCCGGCATCTGGTGGCGCTGCCGATCGCCTATTTCGAGGCG CGGCGCGCCGGCGATTCGGTGGCACGGGTGCGCGAGCTGGAGCATATCCGCAACTTCATCACCAGCTCGGCGCTCACTCT GGTGATCGACCTCGCCTTCACCTTCGTGTTCCTGGGCGTGATGTTCTACTATTCGCCGTACCTCACTTGGATCGTGGTCG GCTCGTTCCCGTTCTACATCGCGCTGTCGGCCGGTGTGACGCCGATCTTCAAGAGGCGGCTCGACGTCAAGTTCGACCGC GGCGCCGAGAACCAAGCCTTCCTGGTCGAGACCGTCACCGCTATCCAGACCTTAAAGGCGATGGCGATCGAGCCGCAGAT GCAGCGGCGCTGGGAGGAGCAGCTCGCCGGCTACGTCGGCGCCAGCTTCGAGGTGCTGTCGCTCGGCAACTGGGCCAGCC AGTTGGTGCAGTTCATCAGCAAGATCGTCACCGCGCTGACGCTGTATTTTGGCGCGCATCTGGTGATCGAGGGCAGTCTG AGTGTCGGCGAGCTGATCGCCTTCAACATGCTGGCCGGGCGGGTGGCGCAGCCGGTGCTGCGGCTGGCGCAGCTGTGGCA GGATTTCCACCAGGCGCGGCTGTCGGTGGCGCGGCTCGGCGACATCCTCAACACCACACCCGAGCCGGCGTTCAACCCCG GCCGCGCGGCGCTGCCACCGGTGCGCGGCGAGGTGGTGTTCGATCACGTCCACTTCCGCTACCGCATCGACGCGCCTCTG GCGCTGCACGATATCAGCCTCAAGGTGCCGGTCGGGCAGGTCGTCGGCATCGTCGGCCCCTCCGGCTCCGGCAAGTCGAC CCTGACCAAGCTGATCCAGCGGCTGTACGTCCCCGAGGGCGGCCGCATCCTGATCGACGGCATCGATCTCACGGTGGCCG ACGTCACCTGGCTGCGGCGGCAGATCGGCGCGGTGCTGCAGGAGAACGTGCTGTTCAACCGCTCGATCCGCGACAACATC GCGCTGGCTGATCCCGGCATGGCCATGGAGCGGGTGATCCAGGCGGCCGAGCTCGCCGGCGCCCATGAGTTCATTCTCGG TCTGCCCGACGGCTACGACACGGTGGTGGGCGAGCGCGGCGCCAGCCTGTCCGGCGGCCAGCGCCAGCGCATCGCGATCG CGCGTGCGCTGGTCACCAATCCGCGCATCCTGATCTTCGACGAGGCGACCTCGGCGCTCGACTATGAGAGCGAGAACATC ATCCAGCGCAACATGCGCAGGATCTGCGCCGGGCGCACCGTGTTCATCATCGCCCACCGGCTGTCGGCGGTGCGCAACGC CGACCGCATCATCACCATCGAGAACGGTCGCTTGGTCGAGGACGGCACCCATGACGAGCTGATCAAGCGTGCCGGGCGCT ACGCCACCCTGCATCAGATCCAGGCGGGCCTGCATGTCGTCGGCTGA Protein sequence : MTARQNDTGLDCLTLLLRFHQVAVDPAQIAHQLAGAKVSVNEMLRCSRQLKLKARAVRQTWDGLAKLPLPAIAARADGSF VILGQVTAETALVQDPLVNRPQSLKRAEFEANWTGTIVLMARRASLTDLARRFDVTWFLQAMHKYRRLLGEVLLASFFLQ LFGLVTPLFFQVVTDKVLTHRGYTTLDVLVFGLVTVTIFETALGGLRTYVFSHTTNRIDVELGARLFRHLVALPIAYFEA RRAGDSVARVRELEHIRNFITSSALTLVIDLAFTFVFLGVMFYYSPYLTWIVVGSFPFYIALSAGVTPIFKRRLDVKFDR GAENQAFLVETVTAIQTLKAMAIEPQMQRRWEEQLAGYVGASFEVLSLGNWASQLVQFISKIVTALTLYFGAHLVIEGSL SVGELIAFNMLAGRVAQPVLRLAQLWQDFHQARLSVARLGDILNTTPEPAFNPGRAALPPVRGEVVFDHVHFRYRIDAPL ALHDISLKVPVGQVVGIVGPSGSGKSTLTKLIQRLYVPEGGRILIDGIDLTVADVTWLRRQIGAVLQENVLFNRSIRDNI ALADPGMAMERVIQAAELAGAHEFILGLPDGYDTVVGERGASLSGGQRQRIAIARALVTNPRILIFDEATSALDYESENI IQRNMRRICAGRTVFIIAHRLSAVRNADRIITIENGRLVEDGTHDELIKRAGRYATLHQIQAGLHVVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 57 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 57 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BRADO6201 | YP_001208064.1 | toxin secretion ABC transporter ATP-binding and membrane protein | VFG1501 | Protein | 0.0 | 57 |
| BRADO6201 | YP_001208064.1 | toxin secretion ABC transporter ATP-binding and membrane protein | VFG0907 | Protein | 0.0 | 57 |
| BRADO6201 | YP_001208064.1 | toxin secretion ABC transporter ATP-binding and membrane protein | VFG1557 | Protein | 0.0 | 57 |
| BRADO6201 | YP_001208064.1 | toxin secretion ABC transporter ATP-binding and membrane protein | VFG0841 | Protein | 2e-174 | 56 |
| BRADO6201 | YP_001208064.1 | toxin secretion ABC transporter ATP-binding and membrane protein | VFG1269 | Protein | 1e-175 | 55 |
