Gene Information

Name : DehaBAV1_0396 (DehaBAV1_0396)
Accession : YP_001213859.1
Strain : Dehalococcoides sp. BAV1
Genome accession: NC_009455
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 399945 - 400706 bp
Length : 762 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAACAAAAAACAAACTTCTGCAGAACAACCCATTATCAAGATTGAAAACATCCAAAAACATTTTGGGCGGGTTCAGGC
CTTGCGCGGGGTAAGCCTTGAAGTAAAAAAAGGCGAAGTAGTGGTCATTATCGGCCCTTCGGGTTCGGGTAAATCTACCC
TGTTACGCTGTATAAACCGCTTGGAAGAATATGATTCAGGCAAAATAACCGTAGACGGCATTACCCTTGACACCACCGAA
AATATCAATCATGTCCGCCGTGAGGTAGGCATGGTTTTTCAGTCCTTCAACCTGTTTTCCCACCTGAAGGTTATTGACAA
CATAACTTTAGCTCAGTGCCAGGTGAGGAAACGTACCAAAGAGGAAGCCGCGGAGAATGCGGCAGACCTGTTAAAGAAGG
TGGGCATACCGGACAAGGCTCATGCCTTTCCCCTTCAGCTATCAGGCGGCCAGCAGCAGCGGGTAGCCATAGCCAGAGCT
CTGGCCATGAATCCCCAGATAATGCTTTTTGACGAGCCGACTTCCGCCCTTGACCCTGAAATGATAAAAGAGGTTCTGGA
CGTAATGACCACTCTGGCCAAAGAGGGTATGACTATGGTAGTGGTATCTCACGAAATGGGTTTTGCCCGAGCAGCGGCTG
ACAGGGTAATTTTCATGGACGAAGGCCTGATAGTGGAAAGTGCCCCCCCGAATGAATTTTTCACTAACCCCAAACATGAA
AGAACCAAGCTCTTTCTGTCTAAAATCCTGCATAACTCCTAG

Protein sequence : 
MNKKQTSAEQPIIKIENIQKHFGRVQALRGVSLEVKKGEVVVIIGPSGSGKSTLLRCINRLEEYDSGKITVDGITLDTTE
NINHVRREVGMVFQSFNLFSHLKVIDNITLAQCQVRKRTKEEAAENAADLLKKVGIPDKAHAFPLQLSGGQQQRVAIARA
LAMNPQIMLFDEPTSALDPEMIKEVLDVMTTLAKEGMTMVVVSHEMGFARAAADRVIFMDEGLIVESAPPNEFFTNPKHE
RTKLFLSKILHNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehaBAV1_0396 YP_001213859.1 ABC transporter NC_012469.1.7686878. Protein 2e-28 41
DehaBAV1_0396 YP_001213859.1 ABC transporter NC_012469.1.7685735. Protein 5e-29 41